RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 KLHL1Q9NR64 748 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 LATS2Q9NRM7 1088 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 PAK5Q9P286 719 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 SEC14L3Q9UDX4 400 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 COQ4Q9Y3A0 265 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 CMAHPQ9Y471 501 aa9.03□□□□□ -0.96
PTPRA-204ENST00000380393 DENND4AQ7Z401 1863 aa9.02□□□□□ -0.96
PTPRA-204ENST00000380393 BBIP1A8MTZ0 92 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 TARM1B6A8C7 271 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 LYRM1O43325 122 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PRSS23O95084 383 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 SIX6O95475 246 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PEX11BO96011 259 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 RAP2AP10114 183 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ASPAP45381 313 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 RAB5BP61020 215 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ILF3Q12906 894 aaKnown RBP eCLIP9.02□□□□□ -0.973e-10■■■□□ 15.1
PTPRA-204ENST00000380393 ELP2Q6IA86 826 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 NOTUMQ6P988 496 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ATPAF2Q8N5M1 289 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 DUSP18Q8NEJ0 188 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 OR11H7Q8NGC8 314 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 LRRC58Q96CX6 371 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 SCRN2Q96FV2 425 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PGLYRP2Q96PD5 576 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 DUSP26Q9BV47 211 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF879B4DU55 563 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 FXYD1O00168 92 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PHYHO14832 338 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 MITFO75030 526 aaPredicted RBP9.02□□□□□ -0.97
PTPRA-204ENST00000380393 TULP3O75386 442 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 UBXN7O94888 489 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 EGFP01133 1207 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PAMP19021 973 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 RAB4AP20338 218 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 NNMTP40261 264 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 GLRBP48167 497 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 SULT1E1P49888 294 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 GTF2A2P52657 109 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 OPCMLQ14982 345 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ALG11Q2TAA5 492 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ADGRF1Q5T601 910 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 DCAF15Q66K64 600 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 BICRALQ6AI39 1079 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 FAM109BQ6ICB4 259 aaPredicted RBP9.02□□□□□ -0.97
PTPRA-204ENST00000380393 ALKAL2Q6UX46 152 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PHF13Q86YI8 300 aaPredicted RBP9.02□□□□□ -0.97
PTPRA-204ENST00000380393 CAMKVQ8NCB2 501 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM161BQ8NDZ6 487 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 TMIEQ8NEW7 156 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 TSPEARQ8WU66 669 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 FBLIM1Q8WUP2 373 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 GATAD2BQ8WXI9 593 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 TADA1Q96BN2 335 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 SERINC2Q96SA4 455 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PKMYT1Q99640 499 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 PPP4R1LQ9P1A2 415 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 WASF3Q9UPY6 502 aa9.02□□□□□ -0.97
PTPRA-204ENST00000380393 WDR27A2RRH5 827 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 A8MVJ9 347 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 D6RAR5 112 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 CRTAPO75718 401 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 HCKP08631 526 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 POU3F2P20265 443 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 PTBP1P26599 531 aaKnown RBP eCLIP9.01□□□□□ -0.975e-7■■■■□ 19.7
PTPRA-204ENST00000380393 DOC2AQ14183 400 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 NADSYN1Q6IA69 706 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ZCCHC12Q6PEW1 402 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 FUNDC1Q8IVP5 155 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ZDHHC1Q8WTX9 485 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 HTR3CQ8WXA8 447 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ZBED6CLQ96FA7 236 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 PDGFCQ9NRA1 345 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SNTG1Q9NSN8 517 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 DNAJB9Q9UBS3 223 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 STUB1Q9UNE7 303 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 WASH3PC4AMC7 463 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 KPNA3O00505 521 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 KHDRBS3O75525 346 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ATP6AP2O75787 350 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 AGR2O95994 175 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SLC10A3P09131 477 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 MAGEA2P43356 314 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 RGS6P49758 472 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 PGGT1BP53609 377 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 CTSCP53634 463 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 AP1S1P61966 158 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 GLYR1Q49A26 553 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ATP13A5Q4VNC0 1218 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SLC39A4Q6P5W5 647 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 LRRC8DQ7L1W4 858 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 TAC4Q86UU9 113 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 NUDT13Q86X67 352 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 PROSER1Q86XN7 944 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ARRDC1Q8N5I2 433 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 C12orf29Q8N999 325 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms