RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 TSPAN11A1L157 253 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MEIOCA2RUB1 952 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ALDOBP05062 364 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 JUNP05412 331 aaKnown RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 ADRB1P08588 477 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SUPT20HL2P0C7V6 817 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 YBX3P16989 372 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■□□□ 11.7
LIG3-202ENST00000378526 ELK4P28324 431 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ARL2P36404 184 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 GRB2P62993 217 aaKnown RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 UGCGQ16739 394 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MFSD14CQ5VZR4 134 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MAP1SQ66K74 1059 aaPredicted RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 SV2AQ7L0J3 742 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 PXT1Q8NFP0 134 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 RNF215Q9Y6U7 377 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 KIAA0355O15063 1070 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 CAP1Q01518 475 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SLC6A3Q01959 620 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 FAM174BQ3ZCQ3 159 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SYT13Q7L8C5 426 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ANKS1BQ7Z6G8 1248 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 HS3ST5Q8IZT8 346 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 PLD5Q8N7P1 536 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 TTLL6Q8N841 843 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 TSTD1Q8NFU3 115 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 EPYCQ99645 322 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 OMDQ99983 421 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 COLEC11Q9BWP8 271 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 UBE2J1Q9Y385 318 aaPredicted RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 IL1AP01583 271 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 FPR1P21462 350 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ADIGQ0VDE8 80 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 FXNQ16595 210 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SIAH1Q8IUQ4 282 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 AQP11Q8NBQ7 271 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 LPAR1Q92633 364 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 DCP1AQ9NPI6 582 aaPredicted RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 EQTNQ9NQ60 294 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 CHST7Q9NS84 486 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MAN2C1Q9NTJ4 1040 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 RYDENQ9NUL5 291 aaKnown RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 KCMF1Q9P0J7 381 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 A0A1W2PPL8 197 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SMAD9O15198 467 aaKnown RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 SLC7A4O43246 635 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 KIAA0513O60268 411 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MED6O75586 246 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MMP7P09237 267 aaPredicted RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 PSPHP78330 225 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 CEBPEQ15744 281 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ARL13AQ5H913 290 aaPredicted RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 DESI1Q6ICB0 168 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 HEPHL1Q6MZM0 1159 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 CEP68Q76N32 757 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SLC15A3Q8IY34 581 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 HPSE2Q8WWQ2 592 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 FGGYQ96C11 551 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 UHRF2Q96PU4 802 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 B3GNT5Q9BYG0 378 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 SOX17Q9H6I2 414 aaPredicted RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 NIPAL2Q9H841 368 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 ERVMER34-1Q9H9K5 563 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 MRM3Q9HC36 420 aaKnown RBP8.47□□□□□ -1.05
LIG3-202ENST00000378526 COPS7AQ9UBW8 275 aa8.47□□□□□ -1.05
LIG3-202ENST00000378526 KCNJ13O60928 360 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 TMEM127O75204 238 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 OR2C1O95371 312 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 IL12BP29460 328 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 NR0B1P51843 470 aaKnown RBP8.46□□□□□ -1.05
LIG3-202ENST00000378526 PTTG1IPP53801 180 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 GPR68Q15743 365 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 GPR142Q7Z601 462 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 SGPP2Q8IWX5 399 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 ADAMTS19Q8TE59 1207 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 GLYATL1Q969I3 302 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 ZBTB8AQ96BR9 441 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 TIFAQ96CG3 184 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 TSSK3Q96PN8 268 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 PRRT1Q99946 306 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 SLC2A8Q9NY64 477 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 B3GNT2Q9NY97 397 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 GHRLQ9UBU3 117 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 KIAA0586Q9BVV6 1533 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 GATCO43716 136 aaKnown RBP8.46□□□□□ -1.05
LIG3-202ENST00000378526 DEDDO75618 318 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 MATN4O95460 622 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 GOT2P00505 430 aaKnown RBP8.46□□□□□ -1.05
LIG3-202ENST00000378526 AKR1C4P17516 323 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 EFEMP1Q12805 493 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 ZNF546Q86UE3 836 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 SLC15A4Q8N697 577 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 OR4K1Q8NGD4 311 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 SLC22A17Q8WUG5 538 aa8.46□□□□□ -1.05
LIG3-202ENST00000378526 ZNF606Q8WXB4 792 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms