RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MTMR10Q9NXD2 777 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SARDHQ9UL12 918 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 OAS3Q9Y6K5 1087 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 A0A075B6Q4 140 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 A0A087X1B8 175 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CBY3A6NI87 242 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NME4O00746 187 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 GADD45GO95257 159 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CAPN3P20807 821 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RFC3P40938 356 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 KCNQ1P51787 676 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NUDT6P53370 316 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 MBTD1Q05BQ5 628 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 CRYZQ08257 329 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 NTRK2Q16620 822 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 DET1Q7L5Y6 550 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 C2orf69Q8N8R5 385 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 STK35Q8TDR2 534 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 SLCO4A1Q96BD0 722 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 P2RY11Q96G91 374 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 POLR2J2Q9GZM3 115 aaKnown RBP11.37□□□□□ -0.59
NPHP4-202ENST00000378161 RGS18Q9NS28 235 aa11.37□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 HOXB8P17481 243 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 LAP3P28838 519 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ETV6P41212 452 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 POU3F4P49335 361 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 AKR1C8PQ5T2L2 129 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ARHGAP40Q5TG30 622 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 FKBP10Q96AY3 582 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF778Q96MU6 729 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 OR2M2Q96R28 347 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 SLC28A3Q9HAS3 691 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 CDHR5Q9HBB8 845 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 PCDHGB7Q9Y5F8 929 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 MYH3P11055 1940 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 SLC15A5A6NIM6 579 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 M0R036 132 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 NPHS1O60500 1241 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 CYTIPO60759 359 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 CHRM3P20309 590 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 SSTR4P31391 388 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 RABL3Q5HYI8 236 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 TEX30Q5JUR7 227 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 LIN54Q6MZP7 749 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 RPLP0P6Q8NHW5 317 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 LRRN4Q8WUT4 740 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 KIAA1191Q96A73 305 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 YIPF6Q96EC8 236 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 SLC30A3Q99726 388 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 IFT27Q9BW83 186 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 RCOR3Q9P2K3 495 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 GRM5P41594 1212 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 MAGEA12P43365 314 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 TAF1AQ15573 450 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 NOL9Q5SY16 702 aaKnown RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 GPR153Q6NV75 609 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 LAPTM4BQ86VI4 370 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 GPR65Q8IYL9 337 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 FAM46DQ8NEK8 389 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ATP6V1C2Q8NEY4 427 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 NLGN2Q8NFZ4 835 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 OSMRQ99650 979 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ACBD6Q9BR61 282 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 C1QTNF6Q9BXI9 259 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 ENAMQ9NRM1 1142 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 NUDT15Q9NV35 164 aa11.36□□□□□ -0.59
NPHP4-202ENST00000378161 MRTO4Q9UKD2 239 aaKnown RBP11.36□□□□□ -0.59
NPHP4-202ENST00000378161 NRCAMQ92823 1304 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 ABCD4O14678 606 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SCAMP1O15126 338 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 B4GALT5O43286 388 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SCELO95171 688 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 FARS2O95363 451 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 GLP2RO95838 553 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 AHSGP02765 367 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MATKP42679 507 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TRAM1Q15629 374 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TOR1AIP1Q5JTV8 583 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CELF3Q5SZQ8 465 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 KIAA1614Q5VZ46 1190 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CES5AQ6NT32 575 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 C9orf62Q8N4C0 152 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CAMKVQ8NCB2 501 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TM9SF4Q92544 642 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RFT1Q96AA3 541 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 GAL3ST4Q96RP7 486 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms