RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PRAMEF10O60809 474 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 CDK1P06493 297 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 ELFN1P0C7U0 828 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 GADD45AP24522 165 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 ELP6Q0PNE2 266 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 TSTA3Q13630 321 aaPredicted RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 INAVAQ3KP66 663 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 GCNT6Q5T4J0 391 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 PARS2Q7L3T8 475 aaKnown RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 RNF130Q86XS8 419 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 CFAP206Q8IYR0 622 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 MMP21Q8N119 569 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 LGI4Q8N135 537 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 C16orf78Q8WTQ4 265 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 TCF25Q9BQ70 676 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 SGPP1Q9BX95 441 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 TMEM38AQ9H6F2 299 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 PRM3Q9NNZ6 103 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 THSD1Q9NS62 852 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 ACER3Q9NUN7 267 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 VCANP13611 3396 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 PCDH17O14917 1159 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 GPR37L1O60883 481 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 ADRA2AP08913 450 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 C1GALT1C1LP0DN25 315 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 PPM1AP35813 382 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 LIMS1P48059 325 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 IDH2P48735 452 aaKnown RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 LIMK1P53667 647 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 CRISP3P54108 245 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 RPS3AP61247 264 aaKnown RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 SPIBQ01892 262 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 TAP2Q03519 686 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 FCHO2Q0JRZ9 810 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 C2orf80Q0P641 193 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 LRRC74AQ0VAA2 488 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 TIGD6Q17RP2 521 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 SOWAHCQ53LP3 525 aaPredicted RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 FAM71E1Q6IPT2 247 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 FAM180BQ6P0A1 224 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 CCDC80Q76M96 950 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 FBXO15Q8NCQ5 510 aaPredicted RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 FCGR1BQ92637 280 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 FOPNLQ96NB1 174 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 RSPO3Q9BXY4 272 aaPredicted RBP10.47□□□□□ -0.73
BEST1-201ENST00000378043 SPASTQ9UBP0 616 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 DKK3Q9UBP4 350 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 MAP4K5Q9Y4K4 846 aa10.47□□□□□ -0.73
BEST1-201ENST00000378043 AIREO43918 545 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 STSP08842 583 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 ANXA8P13928 327 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 XPAP23025 273 aaPredicted RBP10.46□□□□□ -0.73
BEST1-201ENST00000378043 IRS1P35568 1242 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 PCBP3P57721 371 aaKnown RBP10.46□□□□□ -0.73
BEST1-201ENST00000378043 TAS2R50P59544 299 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 CDK6Q00534 326 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 ZNF77Q15935 545 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 PLEKHG7Q6ZR37 379 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 PLD3Q8IV08 490 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.46□□□□□ -0.73
BEST1-201ENST00000378043 KLHL23Q8NBE8 558 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 MCFD2Q8NI22 146 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 ZSWIM3Q96MP5 696 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 DACH2Q96NX9 599 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 YME1L1Q96TA2 773 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 EHD1Q9H4M9 534 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 POLE4Q9NR33 117 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 POFUT2Q9Y2G5 429 aa10.46□□□□□ -0.73
BEST1-201ENST00000378043 HIDE1A8MVS5 230 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 PTHP01270 115 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 KLK1P06870 262 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 ADH1AP07327 375 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 POU2F1P14859 743 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 CSF2RAP15509 400 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 EIF2DP41214 584 aaKnown RBP10.46□□□□□ -0.74
BEST1-201ENST00000378043 XCR1P46094 333 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 EPHA5P54756 1037 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 RBBP4Q09028 425 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 STARD3Q14849 445 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 CRB2Q5IJ48 1285 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 SLC46A3Q7Z3Q1 461 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 VN1R5Q7Z5H4 357 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 ZNF547Q8IVP9 402 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 NLGN4XQ8N0W4 816 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 PPCDCQ96CD2 204 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 REPS1Q96D71 796 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 DTD2Q96FN9 168 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 COQ10AQ96MF6 247 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 RAD9AQ99638 391 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 EFCAB11Q9BUY7 163 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 SORBS1Q9BX66 1292 aaKnown RBP10.46□□□□□ -0.74
BEST1-201ENST00000378043 EPS8L2Q9H6S3 715 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 RNF167Q9H6Y7 350 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 MYNNQ9NPC7 610 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 TMEM39AQ9NV64 488 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 ATAD3AQ9NVI7 634 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 TAS2R9Q9NYW1 312 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 TRIM17Q9Y577 477 aa10.46□□□□□ -0.74
BEST1-201ENST00000378043 NUP210Q8TEM1 1887 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms