RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EPOP01588 193 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 ALPPP05187 535 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 CCNYL3P0C7X3 344 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 BCKDHAP12694 445 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 ERP29P30040 261 aaKnown RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 GNPDA1P46926 289 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 OLR1P78380 273 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 MED22Q15528 200 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 TEAD2Q15562 447 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 SSX1Q16384 188 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 IQCCQ4KMZ1 466 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 USP39Q53GS9 565 aaKnown RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 ZNF648Q5T619 568 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 PDE12Q6L8Q7 609 aaKnown RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 IDO2Q6ZQW0 420 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 RNF130Q86XS8 419 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 RGL4Q8IZJ4 473 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 UBE2J2Q8N2K1 259 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 HJURPQ8NCD3 748 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 VANGL1Q8TAA9 524 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 CLP1Q92989 425 aaKnown RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 REPS1Q96D71 796 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 MGLLQ99685 303 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 UCK2Q9BZX2 261 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 LINC00597Q9H2U6 94 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 LRTM1Q9HBL6 345 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.42□□□□□ -0.42
MSH5-204ENST00000375755 TMEM184CQ9NVA4 438 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 NLE1Q9NVX2 485 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 MAN2B2Q9Y2E5 1009 aa12.42□□□□□ -0.42
MSH5-204ENST00000375755 NUP214P35658 2090 aaPredicted RBP12.42□□□□□ -0.42
MSH5-204ENST00000375755 PCP4L1A6NKN8 68 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ZNF821O75541 412 aaPredicted RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 FHP07954 510 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 EPCAMP16422 314 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 HSPA7P48741 367 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 GZMKP49863 264 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 CAMK1Q14012 370 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 FAM109BQ6ICB4 259 aaPredicted RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 UBE2Q1Q7Z7E8 422 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 TMEM25Q86YD3 366 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ZSWIM3Q96MP5 696 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ASPNQ9BXN1 380 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 TMPRSS11EQ9UL52 423 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 SLC6A14Q9UN76 642 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 SHOXO15266 292 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 MOSPD3O75425 235 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ESR1P03372 595 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 CYP2A6P11509 494 aaPredicted RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 S100A3P33764 101 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 KDELR2P33947 212 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ASAH1Q13510 395 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 LRRC73Q5JTD7 316 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 SDE2Q6IQ49 451 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ZNF367Q7RTV3 350 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 FAM124AQ86V42 546 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 LIX1LQ8IVB5 337 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
MSH5-204ENST00000375755 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 CRELD1Q96HD1 420 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 FRMD6Q96NE9 622 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 NSUN3Q9H649 340 aaKnown RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 EXOSC4Q9NPD3 245 aaKnown RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 DLGAP4Q9Y2H0 992 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 INSL6Q9Y581 213 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 LEUTXA8MZ59 168 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 PLK4O00444 970 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 NOS1APO75052 506 aaPredicted RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 GABRB1P18505 474 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 GDF5P43026 501 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 SCN1BQ07699 218 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 BTBD16Q32M84 506 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ESCO2Q56NI9 601 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 TOR1AIP1Q5JTV8 583 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 OR4F3Q6IEY1 312 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 AFTPHQ6ULP2 937 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ZZZ3Q8IYH5 903 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ZNF557Q8N988 423 aaPredicted RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 B3GNT7Q8NFL0 401 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 ING5Q8WYH8 240 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 FEVQ99581 238 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 RNF121Q9H920 327 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 CFAP20Q9Y6A4 193 aaKnown RBP12.41□□□□□ -0.42
MSH5-204ENST00000375755 COMMD10Q9Y6G5 202 aa12.41□□□□□ -0.42
MSH5-204ENST00000375755 USP34Q70CQ2 3546 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 ARHGEF9O43307 516 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 GUCA1CO95843 209 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 GLUD1P00367 558 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 ADH1AP07327 375 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 HLA-FP30511 346 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 MC4RP32245 332 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 CLCN4P51793 760 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 AP2S1P53680 142 aaPredicted RBP12.4□□□□□ -0.42
MSH5-204ENST00000375755 VMACQ2NL98 169 aa12.4□□□□□ -0.42
MSH5-204ENST00000375755 TTLL9Q3SXZ7 439 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms