RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SLAMF1Q13291 335 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 IRF3Q14653 427 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 PRAMEF9Q5VWM5 478 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 ACSM2BQ68CK6 577 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 METTL2BQ6P1Q9 378 aaKnown RBP10.65□□□□□ -0.7
CCDC40-203ENST00000374877 TMPRSS11AQ6ZMR5 421 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 MACC1Q6ZN28 852 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 TSEN54Q7Z6J9 526 aaKnown RBP10.65□□□□□ -0.7
CCDC40-203ENST00000374877 DNAJB7Q7Z6W7 309 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-203ENST00000374877 C11orf65Q8NCR3 313 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 FLCNQ8NFG4 579 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 PIH1D2Q8WWB5 315 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 FAM8A1Q9UBU6 413 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 GRIP1Q9Y3R0 1128 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 PLXNA4Q9HCM2 1894 aa10.65□□□□□ -0.7
CCDC40-203ENST00000374877 J3KTA2 159 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 ADRA2AP08913 450 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 CD72P21854 359 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 ARPC4P59998 168 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 MADCAM1Q13477 382 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 GAB1Q13480 694 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 BOP1Q14137 746 aaKnown RBP10.64□□□□□ -0.71
CCDC40-203ENST00000374877 EIF4HQ15056 248 aaKnown RBP10.64□□□□□ -0.71
CCDC40-203ENST00000374877 SHHQ15465 462 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 RGNQ15493 299 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 PPP2R2DQ66LE6 453 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 NXPE1Q8N323 547 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 SNTG1Q9NSN8 517 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 SH3BP4Q9P0V3 963 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 MEIOCA2RUB1 952 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 GABRB1P18505 474 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 AOAHP28039 575 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 RFX2P48378 723 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 CDC42P60953 191 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 SELENOWP63302 87 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 IRF8Q02556 426 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 BAK1Q16611 211 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 PTCHD4Q6ZW05 846 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 LAX1Q8IWV1 398 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 BBS7Q8IWZ6 715 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 KREMEN2Q8NCW0 462 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 C9orf43Q8TAL5 461 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-203ENST00000374877 HHIPQ96QV1 700 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 LRG1P02750 347 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 POU2F2P09086 479 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 CKMT1AP12532 417 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 CCR7P32248 378 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 CA8P35219 290 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 RPS19P39019 145 aaKnown RBP10.64□□□□□ -0.71
CCDC40-203ENST00000374877 DDOSTP39656 456 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 SOX3P41225 446 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 TGM4P49221 684 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 LIMK1P53667 647 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 GANABQ14697 944 aaKnown RBP10.64□□□□□ -0.71
CCDC40-203ENST00000374877 SSX1Q16384 188 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 MICAQ29983 383 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 HKDC1Q2TB90 917 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 GGTA1PQ4G0N0 100 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 IFI44LQ53G44 452 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 CPTPQ5TA50 214 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 TSPAN33Q86UF1 283 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 ATCAYQ86WG3 371 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 UBE2J2Q8N2K1 259 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 OR8J2Q8NGG1 315 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 PLD4Q96BZ4 506 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 RETREG1Q9H6L5 497 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 DNAJC11Q9NVH1 559 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 VPS29Q9UBQ0 182 aa10.64□□□□□ -0.71
CCDC40-203ENST00000374877 A0A1W2PQ09 198 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 COCHO43405 550 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 STC2O76061 302 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 CCNB2O95067 398 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 ETFAP13804 333 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 PRKCAP17252 672 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 PRPH2P23942 346 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 HNF1BP35680 557 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 SPAM1P38567 509 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 MXD1Q05195 221 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 DOC2BQ14184 412 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 PTGES3Q15185 160 aaKnown RBP10.63□□□□□ -0.71
CCDC40-203ENST00000374877 PLPP4Q5VZY2 271 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 GPR155Q7Z3F1 870 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 KRT73Q86Y46 540 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 VPS37AQ8NEZ2 397 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 OR7G1Q8NGA0 311 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 WBP2Q969T9 261 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 VPS35Q96QK1 796 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 MCCC1Q96RQ3 725 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-203ENST00000374877 IL4I1Q96RQ9 567 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 FAM129BQ96TA1 746 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 LMAN2LQ9H0V9 348 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 RERGLQ9H628 205 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 TRIM39Q9HCM9 518 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 ABCB8Q9NUT2 735 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 TNFRSF10AO00220 468 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 PCDH17O14917 1159 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 DPM1O60762 260 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 TBL1XO60907 577 aa10.63□□□□□ -0.71
CCDC40-203ENST00000374877 C8AP07357 584 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms