RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CCNHP51946 323 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 NDST2P52849 883 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 ARSFP54793 590 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 YBEYP58557 167 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 RHOAP61586 193 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RPS14P62263 151 aaKnown RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 GBE1Q04446 702 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 EEF1A2Q05639 463 aaKnown RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 SLC18A2Q05940 514 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 SIM2Q14190 667 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 ELAVL3Q14576 367 aaKnown RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 PDK2Q15119 407 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 E2F5Q15329 346 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 CST6Q15828 149 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 CCDC6Q16204 474 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 KIF19Q2TAC6 998 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 TTC31Q49AM3 519 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 ODF2Q5BJF6 829 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 OTUD3Q5T2D3 398 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 C10orf62Q5T681 223 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 TYW3Q6IPR3 259 aaKnown RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 NAPEPLDQ6IQ20 393 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RETSATQ6NUM9 610 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 MFSD7Q6UXD7 560 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 PEX26Q7Z412 305 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 NT5DC3Q86UY8 548 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 KATNAL2Q8IYT4 538 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RYBPQ8N488 228 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 PQLC3Q8N755 202 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 PLD5Q8N7P1 536 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 CEP70Q8NHQ1 597 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 KIAA1524Q8TCG1 905 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 GANCQ8TET4 914 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 OR8D1Q8WZ84 308 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 HAUS1Q96CS2 278 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 FAF2Q96CS3 445 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RNF183Q96D59 192 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 SIPA1Q96FS4 1042 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RNF157Q96PX1 679 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 HERPUD2Q9BSE4 406 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RSPH9Q9H1X1 276 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 ZDHHC6Q9H6R6 413 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 PDFQ9HBH1 243 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RASSF1Q9NS23 344 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 RCOR3Q9P2K3 495 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 LHX3Q9UBR4 397 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 UBA2Q9UBT2 640 aaPredicted RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 SUN2Q9UH99 717 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 SARDHQ9UL12 918 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 SUFUQ9UMX1 484 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 DNAJC16Q9Y2G8 782 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 PPP2R2CQ9Y2T4 447 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 HEY1Q9Y5J3 304 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 SPTBP11277 2137 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 MDC1Q14676 2089 aaKnown RBP4.31□□□□□ -1.72
PMS1-202ENST00000374826 CCDC88CQ9P219 2028 aa4.31□□□□□ -1.72
PMS1-202ENST00000374826 hCG_1818297A0A087WSY0 165 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 ZSCAN5CA6NGD5 496 aaPredicted RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 FAM47DPA6NHR8 397 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 MEI4A8MW99 385 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 MCF2LO15068 1137 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 SLC16A5O15375 505 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 CST8O60676 142 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 RNASEH1O60930 286 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 GJB3O75712 270 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 RNASEH2AO75792 299 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 PIGNO95427 931 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 IGSF6O95976 241 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 GSRP00390 522 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 UGT2B4P06133 528 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 MYF6P23409 242 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 CTNNA2P26232 953 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 CHRNA3P32297 505 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 ACSL1P33121 698 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DRD3P35462 400 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 RPL3P39023 403 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 GARSP41250 739 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 CDKN2BP42772 138 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 PTGER3P43115 390 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 GRK6P43250 576 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DHPSP49366 369 aaPredicted RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 GEMIN4P57678 1058 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 MAXP61244 160 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 SNRPD1P62314 119 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 IL10RBQ08334 325 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 SLC10A7Q0GE19 358 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 CCDC173Q0VFZ6 552 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 GALNT2Q10471 571 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 CNTN1Q12860 1018 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 ZNF235Q14590 738 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 PAFAH1B3Q15102 231 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 CYTH1Q15438 398 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 CARD16Q5EG05 197 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 LRRC73Q5JTD7 316 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 LRRC38Q5VT99 294 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 PMS2CLQ68D20 193 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 LPCAT2Q7L5N7 544 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 ASCL5Q7RTU5 278 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DSG4Q86SJ6 1040 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms