RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 C1GALT1Q9NS00 363 aa8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 SEMA3GQ9NS98 782 aa8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 LYARQ9NX58 379 aaKnown RBP8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 MS4A12Q9NXJ0 267 aa8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 CALML5Q9NZT1 146 aa8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 FAM32AQ9Y421 112 aaKnown RBP8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 KLK4Q9Y5K2 254 aa8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 SNX5Q9Y5X3 404 aa8.34□□□□□ -1.07
SNRNP40-202ENST00000373720 GSAPA4D1B5 854 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 K7EQS6 105 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 K7ESM1 405 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 ASNA1O43681 348 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 OXSR1O95747 527 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 IGLV3-19P01714 112 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PCCBP05166 539 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 CEACAM5P06731 702 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 JUNDP17535 347 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 IGFBP5P24593 272 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PBLDP30039 288 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PPP2R1BP30154 601 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PKLRP30613 574 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 CHI3L1P36222 383 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 TAS2R50P59544 299 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 RPS15AP62244 130 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 HYAL1Q12794 435 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 SIM2Q14190 667 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC9A5Q14940 896 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 KIR2DS3Q14952 304 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 TMEM196Q5HYL7 178 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 CATSPEREQ5SY80 951 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 OR4C11Q6IEV9 310 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 FAHD1Q6P587 224 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 XKR5Q6UX68 686 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 ARMCX6Q7L4S7 300 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 CYP4Z1Q86W10 505 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 KRT73Q86Y46 540 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PTOV1Q86YD1 416 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 SVOPQ8N4V2 548 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF655Q8N720 491 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 TOR1AIP2Q8NFQ8 470 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 CLHC1Q8NHS4 586 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 RAB2BQ8WUD1 216 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 FCGR1BQ92637 280 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 ZFYVE19Q96K21 471 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 CAMK1GQ96NX5 476 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 TEFMQ96QE5 360 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 FERD3LQ96RJ6 166 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 INSM2Q96T92 566 aaPredicted RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC35A5Q9BS91 424 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 INPP5KQ9BT40 448 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 MENTQ9BUN1 341 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 BTBD2Q9BX70 525 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 TWSG1Q9GZX9 223 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PCED1AQ9H1Q7 454 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 MTG2Q9H4K7 406 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 IKZF5Q9H5V7 419 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 GIMAP4Q9NUV9 329 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 LIPT1Q9Y234 373 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 COQ6Q9Y2Z9 468 aa8.33□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A1W2PQU0 124 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 BLACEA4D250 179 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 FAM149AA5PLN7 773 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TRIM64BA6NI03 449 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 DUXAA6NLW8 204 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 PDLIM1O00151 329 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MAN2B1O00754 1011 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 PDPK1O15530 556 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TRMUO75648 421 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 LRATO95237 230 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CPSF4O95639 269 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF682O95780 498 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TGFB1P01137 390 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 KLK1P06870 262 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ARAFP10398 606 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MYOGP15173 224 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ATP6V1B1P15313 513 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 RHCEP18577 417 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 HNRNPA2B1P22626 353 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 DCKP27707 260 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TPP2P29144 1249 aaPredicted RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 AKT2P31751 481 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 IFNA8P32881 189 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 BSGP35613 385 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CRATP43155 626 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CCR5P51681 352 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MANFP55145 182 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 PCBP3P57721 371 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 PCBP4P57723 403 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SKP1P63208 163 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 HBA1P69905 142 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CDK6Q00534 326 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 HTR4Q13639 388 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SCARB2Q14108 478 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 NFATC4Q14934 902 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 IRF4Q15306 451 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ZIC1Q15915 447 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms