RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 RP1L1Q8IWN7 2480 aaPredicted RBP9.68□□□□□ -0.86
CLRN3-201ENST00000368671 TRBV11-1A0A0K0K1C0 115 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 GOLGA6L10A0A0M3HER8 536 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CTAGE15A4D2H0 777 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 URADA6NGE7 173 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 DNALI1O14645 258 aaPredicted RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 TFECO14948 347 aaPredicted RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 NRDCO43847 1150 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CDC40O60508 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 TTC4O95801 387 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 RNH1P13489 461 aaKnown RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 SAT1P21673 171 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 SSTR2P30874 369 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 AHRP35869 848 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 FNTAP49354 379 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 KRTAP10-9P60411 292 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 TEDDM1Q5T9Z0 273 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 KIAA0408Q6ZU52 694 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 FGD2Q7Z6J4 655 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 STRA8Q7Z7C7 330 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CTAGE6Q86UF2 777 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 THOC6Q86W42 341 aaKnown RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 IGDCC3Q8IVU1 814 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CNTN4Q8IWV2 1026 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CHERPQ8IWX8 916 aaKnown RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CA13Q8N1Q1 262 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 ANKRD53Q8N9V6 530 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 NFAM1Q8NET5 270 aaPredicted RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CA5BP1Q8WTZ4 195 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 PHF10Q8WUB8 498 aaKnown RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CHTF18Q8WVB6 975 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 SDCCAG3Q96C92 435 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CFAP36Q96G28 342 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 OLFM1Q99784 485 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 AIF1LQ9BQI0 150 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 DEFB126Q9BYW3 111 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 KLHL31Q9H511 634 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 PELI2Q9HAT8 420 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 ZFATQ9P243 1243 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 FBXW2Q9UKT8 454 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 PPT2Q9UMR5 302 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 KLF13Q9Y2Y9 288 aaPredicted RBP9.67□□□□□ -0.86
CLRN3-201ENST00000368671 ASB1Q9Y576 335 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CENPEQ02224 2701 aa9.67□□□□□ -0.86
CLRN3-201ENST00000368671 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 A0A0G2JN53 185 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 A0A1B0GTH9 108 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 TCRBV16S1A1N1A0A5B0 115 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 NPEPPSL1A6NEC2 478 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 POM121CA8CG34 1229 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 C4orf51C9J302 202 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 E9PLN8 166 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CDK2AP1O14519 115 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 HS6ST1O60243 411 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 MYO1DO94832 1006 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 TPOP07202 933 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 ENO2P09104 434 aaPredicted RBP9.66□□□□□ -0.86
CLRN3-201ENST00000368671 TRHRP34981 398 aaPredicted RBP9.66□□□□□ -0.86
CLRN3-201ENST00000368671 PTGS2P35354 604 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 HLCSP50747 726 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CLCN2P51788 898 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 GPR85P60893 370 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 BTN3A2P78410 334 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CRYBG3Q68DQ2 2970 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 NXPE4Q6UWF7 544 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 SBSNQ6UWP8 590 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 MEX3BQ6ZN04 569 aaKnown RBP9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 SULF2Q8IWU5 870 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 EID3Q8N140 333 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CYP4Z2PQ8N1L4 340 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 SLC35F6Q8N357 371 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 POGLUT1Q8NBL1 392 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 TRPV3Q8NET8 790 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 FAM57AQ8TBR7 257 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CCT6BQ92526 530 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 PDLIM2Q96JY6 352 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 PWWP2AQ96N64 755 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 DMRTA2Q96SC8 542 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 OSBPL9Q96SU4 736 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 EGFL8Q99944 293 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 VKORC1Q9BQB6 163 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 NAT9Q9BTE0 207 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 TRIM45Q9H8W5 580 aaPredicted RBP9.66□□□□□ -0.86
CLRN3-201ENST00000368671 PNO1Q9NRX1 252 aaKnown RBP9.66□□□□□ -0.86
CLRN3-201ENST00000368671 COQ3Q9NZJ6 369 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 SLC22A14Q9Y267 594 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 VWA7Q9Y334 891 aa9.66□□□□□ -0.86
CLRN3-201ENST00000368671 IGKV3D-11A0A0A0MRZ8 115 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 KLRC4-KLRK1H3BQV0 150 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 CDC7O00311 574 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 ADAM10O14672 748 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 PEX1O43933 1283 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 ITGA10O75578 1167 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 PDE9AO76083 593 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 WDR47O94967 919 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 SMIM10L1P0DMW3 83 aa9.65□□□□□ -0.86
CLRN3-201ENST00000368671 TFEBP19484 476 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms