RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 LGALS13Q9UHV8 139 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 PCDHGA11Q9Y5H2 935 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 CFAP46Q8IYW2 2715 aa21.15■□□□□ 0.98
ECHDC1-203ENST00000368291 IGHV1-45A0A0A0MS14 117 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 CDC123O75794 336 aaPredicted RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 CLDN9O95484 217 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 HPP00738 406 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 PROCP04070 461 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 KRT4P19013 534 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 TSPAN8P19075 237 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 ATP5F1P24539 256 aaPredicted RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 CRHR1P34998 444 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 PIK3CBP42338 1070 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 EEF1A2Q05639 463 aaKnown RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 AIMP2Q13155 320 aaKnown RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 UNC50Q53HI1 259 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 ZNF678Q5SXM1 525 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 TRIM40Q6P9F5 258 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 C4orf33Q8N1A6 199 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 GALNT16Q8N428 558 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 FAR2Q96K12 515 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 MTERF1Q99551 399 aaKnown RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 ROPN1BQ9BZX4 212 aaPredicted RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 C12orf65Q9H3J6 166 aaKnown RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 ROPN1Q9HAT0 212 aaPredicted RBP21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 DMRT3Q9NQL9 472 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 ADGRE2Q9UHX3 823 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 ZNF225Q9UK10 706 aa21.14■□□□□ 0.98
ECHDC1-203ENST00000368291 FAM227AF5H4B4 570 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 G3V2L1 256 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 PCDH17O14917 1159 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 SH3BGRLO75368 114 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 C8orf89P0DMQ9 161 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 SERPINB1P30740 379 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 HPDP32754 393 aaPredicted RBP21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 RAPSNQ13702 412 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 PCOLCEQ15113 449 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 ZRSR2Q15696 482 aaKnown RBP21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 MFSD4BQ5TF39 518 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 FAM219BQ5XKK7 198 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF793Q6ZN11 406 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 PARP9Q8IXQ6 854 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 PLPP5Q8NEB5 264 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 OR4F6Q8NGB9 312 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 ATP6V1E2Q96A05 226 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 CMTM7Q96FZ5 175 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 NPLQ9BXD5 320 aaPredicted RBP21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 OR51B5Q9H339 312 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF552Q9H707 407 aaPredicted RBP21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF160Q9HCG1 818 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 GPR83Q9NYM4 423 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 PLAAQ9Y263 795 aa21.13■□□□□ 0.97
ECHDC1-203ENST00000368291 SPTA1P02549 2419 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 MAGEB17A8MXT2 336 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 RTCAO00442 366 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 PLIN3O60664 434 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 RNH1P13489 461 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 IMPDH1P20839 514 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 CERS1P27544 350 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 NEK2P51955 445 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 PRKAA2P54646 552 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 CLCQ05315 142 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 IFFO1Q0D2I5 559 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 C19orf57Q0VDD7 668 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 DDX39BQ13838 428 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 MYBPC3Q14896 1274 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 DEPDC1Q5TB30 811 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 KHDRBS2Q5VWX1 349 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 ASB18Q6ZVZ8 466 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 NDUFAF7Q7L592 441 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 TRABD2AQ86V40 505 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 PTRH1Q86Y79 214 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 TSLPQ969D9 159 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 VPS50Q96JG6 964 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 SERINC2Q96SA4 455 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 SMAD5Q99717 465 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 TMEM109Q9BVC6 243 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 ZNF700Q9H0M5 742 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 GRID1Q9ULK0 1009 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 CPAMD8Q8IZJ3 1885 aa21.12■□□□□ 0.97
ECHDC1-203ENST00000368291 B8ZZF3 427 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 TUBBP07437 444 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 CCT5P48643 541 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 MTTPP55157 894 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 RPS13P62277 151 aaKnown RBP21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 BTG2P78543 158 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 GGTA1PQ4G0N0 100 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 TMEM35AQ53FP2 167 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 LETMD1Q6P1Q0 360 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 ZYG11AQ6WRX3 759 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 CHSY3Q70JA7 882 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 MILR1Q7Z6M3 343 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 ANKRD37Q7Z713 158 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 SLC22A9Q8IVM8 553 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 METTL21AQ8WXB1 218 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 L3HYPDHQ96EM0 354 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 IMMP1LQ96LU5 166 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 KCNC2Q96PR1 638 aa21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 WDR77Q9BQA1 342 aaPredicted RBP21.11■□□□□ 0.97
ECHDC1-203ENST00000368291 NSG1A0A0A6YYJ2 146 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms