RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MKLN1Q9UL63 735 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 PEX16Q9Y5Y5 336 aa11.09□□□□□ -0.63
USF1-201ENST00000368019 TRBV5-4A0A0C4DH59 114 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 SPAARA0A1B0GVQ0 90 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 WASH3PC4AMC7 463 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 FAM47E-STBD1D6RA91 191 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 LOC110117498-PIK3R3F6TDL0 507 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 ARHGAP33O14559 1287 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 ASNA1O43681 348 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 DYRK3O43781 588 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 HYAL3O43820 417 aaPredicted RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 FZD6O60353 706 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 STC2O76061 302 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 KLKB1P03952 638 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 EPB42P16452 691 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CD36P16671 472 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 FMO3P31513 532 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 GGT5P36269 586 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CTSKP43235 329 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 DGKGP49619 791 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 DEFA1P59665 94 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 DEFA3P59666 94 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 NCS1P62166 190 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 LAPTM5Q13571 262 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 ENPP2Q13822 863 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 ELOAQ14241 798 aaKnown RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 GBX1Q14549 363 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 PTGR1Q14914 329 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 EIF4HQ15056 248 aaKnown RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 INO80DQ53TQ3 878 aaPredicted RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 CARD16Q5EG05 197 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 SDE2Q6IQ49 451 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 NCEH1Q6PIU2 408 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 SUSD1Q6UWL2 747 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 GCNT7Q6ZNI0 430 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 TPGS1Q6ZTW0 290 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 SLC46A3Q7Z3Q1 461 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 METTL3Q86U44 580 aaKnown RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 HORMAD1Q86X24 394 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 RGL4Q8IZJ4 473 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 PAF1Q8N7H5 531 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 ATL1Q8WXF7 558 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 PIK3R3Q92569 461 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CMTM7Q96FZ5 175 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CRELD1Q96HD1 420 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CDK15Q96Q40 435 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CCDC32Q9BV29 185 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 HOXD1Q9GZZ0 328 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 RIBC2Q9H4K1 309 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 REEP1Q9H902 201 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 VNN3Q9NY84 501 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 WWOXQ9NZC7 414 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 LSM7Q9UK45 103 aaKnown RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 AGO1Q9UL18 857 aaKnown RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 ZNF490Q9ULM2 529 aaPredicted RBP11.08□□□□□ -0.64
USF1-201ENST00000368019 CYP8B1Q9UNU6 501 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 CORO2BQ9UQ03 480 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 SLC27A6Q9Y2P4 619 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 MSRB2Q9Y3D2 182 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 GRIP1Q9Y3R0 1128 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 RAI2Q9Y5P3 530 aa11.08□□□□□ -0.64
USF1-201ENST00000368019 FASNP49327 2511 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 CENPBD1B2RD01 187 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 PLK4O00444 970 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 HAT1O14929 419 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 MED26O95402 600 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 CLDN9O95484 217 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 OXSR1O95747 527 aaPredicted RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 RPLP0P05388 317 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 ABCB1P08183 1280 aaPredicted RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 PIRTP0C851 137 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 TRAPPC2P0DI81 140 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 TRAPPC2BP0DI82 140 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 BCKDHAP12694 445 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 ZNF24P17028 368 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 S100A5P33763 92 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 SOX11P35716 441 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 HMGCLP35914 325 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 MAP2K4P45985 399 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 CLK1P49759 484 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 TPTEP56180 551 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 VBP1P61758 197 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 SIM1P81133 766 aaPredicted RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 SRSF11Q05519 484 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 VMACQ2NL98 169 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 HKDC1Q2TB90 917 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 TIMM50Q3ZCQ8 353 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 FBXO48Q5FWF7 155 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 C10orf120Q5SQS8 335 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 ATAD3BQ5T9A4 648 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 PTRHD1Q6GMV3 140 aaKnown RBP11.07□□□□□ -0.64
USF1-201ENST00000368019 NEK5Q6P3R8 708 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 MACC1Q6ZN28 852 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 PAGE2Q7Z2X7 111 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 ZBTB46Q86UZ6 589 aa11.07□□□□□ -0.64
USF1-201ENST00000368019 MMAAQ8IVH4 418 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms