RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 VMP1Q96GC9 406 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 RASL10BQ96S79 203 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 WDR83Q9BRX9 315 aaKnown RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 SEMA4BQ9NPR2 832 aaPredicted RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 TMEM184CQ9NVA4 438 aa13.53□□□□□ -0.24
VAMP4-202ENST00000367740 PPIEQ9UNP9 301 aaKnown RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
VAMP4-202ENST00000367740 MACROD2A1Z1Q3 448 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 ZNF839A8K0R7 811 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 SIAH2O43255 324 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 IL2RAP01589 272 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 FPR1P21462 350 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 ATP5DP30049 168 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 HSD17B2P37059 387 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 GPR143P51810 404 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 EIF3EP60228 445 aaKnown RBP13.52□□□□□ -0.25
VAMP4-202ENST00000367740 NR1I3Q14994 352 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 HERC3Q15034 1050 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 TERF2Q15554 542 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 ACKR1Q16570 336 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
VAMP4-202ENST00000367740 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 THEMIS2Q5TEJ8 643 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 RTL4Q6ZR62 310 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 RHOT2Q8IXI1 618 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 FBXO15Q8NCQ5 510 aaPredicted RBP13.52□□□□□ -0.25
VAMP4-202ENST00000367740 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 ZNF740Q8NDX6 193 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 SLC13A3Q8WWT9 602 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 NCLNQ969V3 563 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 ISL2Q96A47 359 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 SCYL1Q96KG9 808 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 SLC6A15Q9H2J7 730 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 ZNF703Q9H7S9 590 aaPredicted RBP13.52□□□□□ -0.25
VAMP4-202ENST00000367740 UBTD1Q9HAC8 227 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 FAM114A2Q9NRY5 505 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 PLA2G2EQ9NZK7 142 aa13.52□□□□□ -0.25
VAMP4-202ENST00000367740 LCMT2O60294 686 aaKnown RBP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 SOX30O94993 753 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 SLC35G6P0C7Q6 338 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 RPS3P23396 243 aaKnown RBP eCLIP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 TTPAP49638 278 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 SIX1Q15475 284 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 PARP6Q2NL67 630 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 ASTE1Q2TB18 679 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 DEFB134Q4QY38 66 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 DARS2Q6PI48 645 aaKnown RBP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 ABHD13Q7L211 337 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 OR52K1Q8NGK4 314 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 CCDC77Q9BR77 488 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 GOLPH3Q9H4A6 298 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 CATSPERZQ9NTU4 200 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 GALNT8Q9NY28 637 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 C6orf203Q9P0P8 240 aaPredicted RBP13.51□□□□□ -0.25
VAMP4-202ENST00000367740 RIMKLBQ9ULI2 386 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 CAPN11Q9UMQ6 739 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 SH2B3Q9UQQ2 575 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 ATG4BQ9Y4P1 393 aa13.51□□□□□ -0.25
VAMP4-202ENST00000367740 A0A087X1B8 175 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 ZFAND5O76080 213 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
VAMP4-202ENST00000367740 RFPL3SP0C7P2 107 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 CCL3P10147 92 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 EIF3BP55884 814 aaKnown RBP13.5□□□□□ -0.25
VAMP4-202ENST00000367740 PRAMEP78395 509 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 TNK1Q13470 666 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 KCNJ11Q14654 390 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 CAPN13Q6MZZ7 669 aaPredicted RBP13.5□□□□□ -0.25
VAMP4-202ENST00000367740 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 NEIL3Q8TAT5 605 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 FAM136AQ96C01 138 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 HSPBAP1Q96EW2 488 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 PANX2Q96RD6 677 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
VAMP4-202ENST00000367740 SACM1LQ9NTJ5 587 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 SAMD15Q9P1V8 674 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 MYOTQ9UBF9 498 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 ANAPC5Q9UJX4 755 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 TESMINQ9Y4I5 508 aa13.5□□□□□ -0.25
VAMP4-202ENST00000367740 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.5□□□□□ -0.25
VAMP4-202ENST00000367740 DEFB108AA8MXU0 73 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 AHRRA9YTQ3 701 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 WWP2O00308 870 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 NIPSNAP2O75323 286 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 GYPCP04921 128 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 ALOX12P18054 663 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 HRH2P25021 359 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 CTSSP25774 331 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 IMPA1P29218 277 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 PPP2R1BP30154 601 aa13.49□□□□□ -0.25
VAMP4-202ENST00000367740 NR1H2P55055 460 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms