RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 FHL5Q5TD97 284 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 LGSNQ5TDP6 509 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 SLC6A19Q695T7 634 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 GRHL2Q6ISB3 625 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 C4orf33Q8N1A6 199 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 CA13Q8N1Q1 262 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 GALNT16Q8N428 558 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 EIF1ADQ8N9N8 165 aaKnown RBP13.82□□□□□ -0.2
SF3B5-201ENST00000367569 FAM47BQ8NA70 645 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 GAL3ST3Q96A11 431 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 MS4A6EQ96DS6 147 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 MTBPQ96DY7 904 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 WDR34Q96EX3 536 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 MAGEB10Q96LZ2 347 aaPredicted RBP13.82□□□□□ -0.2
SF3B5-201ENST00000367569 FER1L6-AS2Q96M78 137 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 SMAD5Q99717 465 aaKnown RBP13.82□□□□□ -0.2
SF3B5-201ENST00000367569 MRPL57Q9BQC6 102 aaKnown RBP13.82□□□□□ -0.2
SF3B5-201ENST00000367569 CAPS2Q9BXY5 557 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 EHD1Q9H4M9 534 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
SF3B5-201ENST00000367569 IPPKQ9H8X2 491 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 ZBTB20Q9HC78 741 aaPredicted RBP13.82□□□□□ -0.2
SF3B5-201ENST00000367569 RNF11Q9Y3C5 154 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 TEX15Q9BXT5 2789 aa13.82□□□□□ -0.2
SF3B5-201ENST00000367569 MYOCOSA0A1B0GUC4 107 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 PPP6CO00743 305 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 OR7A17O14581 309 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 AGFG2O95081 481 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 TGFB1P01137 390 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 C8orf89P0DMQ9 161 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 ST13P50502 369 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 CDH13P55290 713 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 STXBP1P61764 594 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 BTG2P78543 158 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 PCOLCEQ15113 449 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 PCBP2Q15366 365 aaKnown RBP eCLIP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 CPSF6Q16630 551 aaKnown RBP eCLIP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 PAGE2BQ5JRK9 111 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 HIST2H2BCQ6DN03 193 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 MED27Q6P2C8 311 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 TIFABQ6ZNK6 161 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 THOC3Q96J01 351 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 CSF3RQ99062 836 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 MTERF1Q99551 399 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 CCDC77Q9BR77 488 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 MS4A8Q9BY19 250 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 TGIF2Q9GZN2 237 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 REXO4Q9GZR2 422 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 OR51B5Q9H339 312 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 ZBTB26Q9HCK0 441 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 SLAMF7Q9NQ25 335 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 LANCL2Q9NS86 450 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 EMCNQ9ULC0 261 aa13.81□□□□□ -0.2
SF3B5-201ENST00000367569 G3BP2Q9UN86 482 aaKnown RBP13.81□□□□□ -0.2
SF3B5-201ENST00000367569 UNC79Q9P2D8 2635 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 IGHV1-45A0A0A0MS14 117 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 NSG1A0A0A6YYJ2 146 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 LRIT2A6NDA9 550 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TCP11X1B4DZS4 312 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 SEMA7AO75326 666 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 CLEC3AO75596 197 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 WFS1O76024 890 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 IGHEP01854 428 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 FHP07954 510 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 RPS17P08708 135 aaKnown RBP13.8□□□□□ -0.2
SF3B5-201ENST00000367569 RNF224P0DH78 156 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 SMIM10L1P0DMW3 83 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 COL6A2P12110 1019 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 MAOAP21397 527 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 NEK2P51955 445 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 CCNG1P51959 295 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 HNRNPFP52597 415 aaKnown RBP13.8□□□□□ -0.2
SF3B5-201ENST00000367569 RHAGQ02094 409 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TRAF3Q13114 568 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 LAPTM5Q13571 262 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 RUNX2Q13950 521 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 ABRAXAS2Q15018 415 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TBCCQ15814 346 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 HIST2H2ACQ16777 129 aaPredicted RBP13.8□□□□□ -0.2
SF3B5-201ENST00000367569 HIST2H2AA3Q6FI13 130 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TRIM40Q6P9F5 258 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 ZNF793Q6ZN11 406 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 ANKRD37Q7Z713 158 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 HPS6Q86YV9 775 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TMEM151AQ8N4L1 468 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TMEM52Q8NDY8 209 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TTLQ8NG68 377 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 OR7G3Q8NG95 312 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 HUS1BQ8NHY5 278 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 ZNF473Q8WTR7 871 aaKnown RBP13.8□□□□□ -0.2
SF3B5-201ENST00000367569 SREK1Q8WXA9 508 aaKnown RBP13.8□□□□□ -0.2
SF3B5-201ENST00000367569 ATP6V1E2Q96A05 226 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 PNPLA2Q96AD5 504 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 SMIM10Q96HG1 83 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 FAR2Q96K12 515 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 QRFPRQ96P65 431 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 IP6K3Q96PC2 410 aa13.8□□□□□ -0.2
SF3B5-201ENST00000367569 TMEM237Q96Q45 408 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms