RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 ATG9BQ674R7 924 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 LIN54Q6MZP7 749 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 AADACL2Q6P093 401 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 TMEM65Q6PI78 240 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 B3GNT6Q6ZMB0 384 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 FAM217AQ8IXS0 508 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 CARFQ8N187 725 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 GLIS1Q8NBF1 620 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 RCBTB1Q8NDN9 531 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR14A16Q8NHC5 309 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 DNAJB8Q8NHS0 232 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 NTMT1Q9BV86 223 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 CUTCQ9NTM9 273 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 TMEM45AQ9NWC5 275 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 MTCH2Q9Y6C9 303 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 DNALI1O14645 258 aaPredicted RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 TPP1O14773 563 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 JAK2O60674 1132 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SP9P0CG40 484 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 NR2F6P10588 404 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 IL7RP16871 459 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 LBPP18428 481 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 GADD45AP24522 165 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 MAOBP27338 520 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OMPP47874 163 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SOX9P48436 509 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 LSSP48449 732 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ATP5J2P56134 94 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 DSCR9P59020 149 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SCAPQ12770 1279 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 GAS6Q14393 721 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ARL6IP1Q15041 203 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 VWA5B1Q5TIE3 1220 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 RFWD3Q6PCD5 774 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 NOXA1Q86UR1 476 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 CLEC4FQ8N1N0 589 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ZNF565Q8N9K5 539 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR51D1Q8NGF3 324 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SETD6Q8TBK2 473 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ADAM32Q8TC27 787 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SSC4DQ8WTU2 575 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SLC38A4Q969I6 547 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 INTS12Q96CB8 462 aaKnown RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 PWWP2AQ96N64 755 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR4C12Q96R67 309 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR6C1Q96RD1 312 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 C14orf119Q9NWQ9 140 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 PAK1IP1Q9NWT1 392 aaPredicted RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 DNAJB12Q9NXW2 375 aaKnown RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 MGAT4CQ9UBM8 478 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 TMEM98Q9Y2Y6 226 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 IQGAP1P46940 1657 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 MBD5Q9P267 1494 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 NRKQ7Z2Y5 1582 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 GCC2Q8IWJ2 1684 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR2T1O43869 369 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ADH4P08319 380 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 LTA4HP09960 611 aaKnown RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 ETS2P15036 469 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ZNF43P17038 809 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 EIF1P41567 113 aaKnown RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 AGFG1P52594 562 aaKnown RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 ERVK-16P61578 105 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 HYAL1Q12794 435 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ZNF211Q13398 564 aaPredicted RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 LY6DQ14210 128 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 IL11RAQ14626 422 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ATP6AP1Q15904 470 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SLC25A52Q3SY17 297 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 FAM78AQ5JUQ0 283 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 NDUFAF5Q5TEU4 345 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ABHD17CQ6PCB6 329 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 QSOX2Q6ZRP7 698 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 NYAP1Q6ZVC0 841 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 GPR180Q86V85 440 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 TIGD4Q8IY51 512 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 DAW1Q8N136 415 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 FAM83FQ8NEG4 500 aaPredicted RBP3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR56A1Q8NGH5 318 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 ZNF671Q8TAW3 534 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 TEX47Q8TBZ9 253 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 AGR3Q8TD06 166 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 TNFRSF13CQ96RJ3 184 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 AIFM2Q9BRQ8 373 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 GINS4Q9BRT9 223 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SLC25A18Q9H1K4 315 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 P2RY12Q9H244 342 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 POMKQ9H5K3 350 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 SERHLQ9NQF3 203 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 PITPNC1Q9UKF7 332 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 CROTQ9UKG9 612 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 RNF150Q9ULK6 438 aa3.94□□□□□ -1.78
USH2A-202ENST00000366942 OR14I1A6ND48 311 aa3.93□□□□□ -1.78
USH2A-202ENST00000366942 NR5A2O00482 541 aa3.93□□□□□ -1.78
USH2A-202ENST00000366942 TBX1O43435 398 aa3.93□□□□□ -1.78
USH2A-202ENST00000366942 PLRG1O43660 514 aaKnown RBP3.93□□□□□ -1.78
USH2A-202ENST00000366942 NUDT21O43809 227 aaKnown RBP3.93□□□□□ -1.78
USH2A-202ENST00000366942 PCDHGA12O60330 932 aa3.93□□□□□ -1.78
USH2A-202ENST00000366942 HCN1O60741 890 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms