RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CLEC4EQ9ULY5 219 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 POFUT2Q9Y2G5 429 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 TRBV5-4A0A0C4DH59 114 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 C1orf226A1L170 272 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CCNB2O95067 398 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 GASTP01350 101 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 SRCP12931 536 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 HOXB6P17509 224 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 SLC6A12P48065 614 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 HBA1P69905 142 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 ABRQ12979 859 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 KRR1Q13601 381 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 PAMR1Q6UXH9 720 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 TPGS1Q6ZTW0 290 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 LRRC70Q7Z2Q7 622 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 NPAS3Q8IXF0 933 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CHCHD4Q8N4Q1 142 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 TP53I13Q8NBR0 393 aaPredicted RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 OR4C15Q8NGM1 316 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 FAM120CQ9NX05 1096 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 RAB23Q9ULC3 237 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 Q9Y3F1 56 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CEP290O15078 2479 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 SYN3O14994 580 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 SCAMP2O15127 329 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 KPNA5O15131 536 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 C6orf47O95873 294 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 CHMP24386 653 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 PFN3P60673 137 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 GALK2Q01415 458 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 DOC2AQ14183 400 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 IFI44LQ53G44 452 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 RNF165Q6ZSG1 346 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 SLC24A5Q71RS6 500 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 LILRA3Q8N6C8 439 aaPredicted RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 OR8J2Q8NGG1 315 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 PAWRQ96IZ0 340 aaKnown RBP13.03□□□□□ -0.32
PRKN-205ENST00000366897 DYRK4Q9NR20 520 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 MARCH5Q9NX47 278 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 KLK4Q9Y5K2 254 aa13.03□□□□□ -0.32
PRKN-205ENST00000366897 MN1Q10571 1320 aaPredicted RBP13.02□□□□□ -0.32
PRKN-205ENST00000366897 TMEM202A6NGA9 273 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 OR2AG2A6NM03 316 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 SCO2O43819 266 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 HNF4AP41235 474 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 NSG1P42857 185 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 SLC11A1P49279 550 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 STK19P49842 368 aaPredicted RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 OLR1P78380 273 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 CDKN3Q16667 212 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CLPPQ16740 277 aaPredicted RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 FAM209AQ5JX71 171 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 OTOP2Q7RTS6 562 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 ZNF367Q7RTV3 350 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 ZNF438Q7Z4V0 828 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 GPR65Q8IYL9 337 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 DEPDC4Q8N2C3 294 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 DENND6BQ8NEG7 585 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 ST13P5Q8NFI4 369 aaPredicted RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 ASB11Q8WXH4 323 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 SNX18Q96RF0 628 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 SLC12A9Q9BXP2 914 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 MGAT4DA6NG13 374 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 PLD2O14939 933 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 SNX4O95219 450 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CYP17A1P05093 508 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CHRNB1P11230 501 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 ANXA8P13928 327 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 JUPP14923 745 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 OR1D2P34982 312 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CA8P35219 290 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 PRIM2P49643 509 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 MNX1P50219 401 aaPredicted RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 NAE1Q13564 534 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 SCARB2Q14108 478 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CRTC1Q6UUV9 634 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 TMIGD1Q6UXZ0 262 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 FAM9CQ8IZT9 166 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 TMCO6Q96DC7 493 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 CITED4Q96RK1 184 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 ACER3Q9NUN7 267 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 MALT1Q9UDY8 824 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 YARS2Q9Y2Z4 477 aaKnown RBP13.02□□□□□ -0.33
PRKN-205ENST00000366897 MAU2Q9Y6X3 613 aa13.02□□□□□ -0.33
PRKN-205ENST00000366897 A0A0B4J293 547 aa13.01□□□□□ -0.33
PRKN-205ENST00000366897 SEPT4O43236 478 aa13.01□□□□□ -0.33
PRKN-205ENST00000366897 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
PRKN-205ENST00000366897 C1SP09871 688 aa13.01□□□□□ -0.33
PRKN-205ENST00000366897 IDSP22304 550 aa13.01□□□□□ -0.33
PRKN-205ENST00000366897 LHCGRP22888 699 aa13.01□□□□□ -0.33
PRKN-205ENST00000366897 PCGF2P35227 344 aa13.01□□□□□ -0.33
PRKN-205ENST00000366897 MVDP53602 400 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms