RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CCDC91Q7Z6B0 441 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 FAM228AQ86W67 206 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 KLHL7Q8IXQ5 586 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 TMCO5AQ8N6Q1 288 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZNF713Q8N859 430 aaPredicted RBP5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 NHLRC2Q8NBF2 726 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 COLGALT1Q8NBJ5 622 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 ATAD1Q8NBU5 361 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 FIBINQ8TAL6 211 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZNF473Q8WTR7 871 aaKnown RBP5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 RAD54LQ92698 747 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 THOC1Q96FV9 657 aaKnown RBP5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 CASD1Q96PB1 797 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 FTHL17Q9BXU8 183 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 SLC2A11Q9BYW1 496 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 DNAI2Q9GZS0 605 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 POMKQ9H5K3 350 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 EVA1AQ9H8M9 152 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 ERAP1Q9NZ08 941 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 ARMCX3Q9UH62 379 aaPredicted RBP5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 DAPK2Q9UIK4 370 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 DMXL1Q9Y485 3027 aa5.17□□□□□ -1.58
RNU4-39P-201ENST00000362455 TRIP12Q14669 1992 aaPredicted RBP5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 FAM186AA6NE01 2351 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 IGLV5-45A0A087WSX0 123 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 C5orf52A6NGY3 159 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 E7EWF7 191 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 EDIL3O43854 480 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 STAG3L1P0CL83 205 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 MNDAP41218 407 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 EEF1A2Q05639 463 aaKnown RBP5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 TNK1Q13470 666 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 NPTX1Q15818 432 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZNF674Q2M3X9 581 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 UGT3A2Q3SY77 523 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 LRRC73Q5JTD7 316 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 CLLU1OSQ5K130 101 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 PLPP4Q5VZY2 271 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 SLC24A5Q71RS6 500 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 HOOK3Q86VS8 718 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 NUDT13Q86X67 352 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 TMEM139Q8IV31 216 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 NAGSQ8N159 534 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 MRPL43Q8N983 215 aaKnown RBP5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 OR11H4Q8NGC9 324 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 LMO3Q8TAP4 145 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 DNASE1L2Q92874 299 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZNF583Q96ND8 569 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 CDCA3Q99618 268 aaPredicted RBP5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 RTP3Q9BQQ7 232 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 SPZ1Q9BXG8 430 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 PSTPIP2Q9H939 334 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 LMAN1LQ9HAT1 526 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 LY9Q9HBG7 655 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 A4GALTQ9NPC4 353 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 CDH7Q9ULB5 785 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 WDR83OSQ9Y284 106 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 PCDHGB1Q9Y5G3 927 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 SIP14410 1827 aa5.16□□□□□ -1.58
RNU4-39P-201ENST00000362455 MICAL3Q7RTP6 2002 aa5.15□□□□□ -1.58
RNU4-39P-201ENST00000362455 PLOD2O00469 737 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 CAPN9O14815 690 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 N4BP1O75113 896 aaKnown RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 RPS6KA5O75582 802 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 GSRP00390 522 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 SNRNP70P08621 437 aaKnown RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 HOXB8P17481 243 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 MSH3P20585 1137 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 EPHA2P29317 976 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 HSD17B3P37058 310 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 KCNJ1P48048 391 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 HOXA1P49639 335 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 RGS7P49802 495 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 DVL1P1P54792 670 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 FOXG1P55316 489 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 MTCP1P56278 107 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 GSDMDP57764 484 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 FAM174BQ3ZCQ3 159 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 ANKRD20A4Q4UJ75 823 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 LACTB2Q53H82 288 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 ANKRD20A8PQ5CZ79 823 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 SPDYCQ5MJ68 293 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 ANKRD20A2Q5SQ80 823 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 ANKRD20A1Q5TYW2 823 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 ANKRD20A3Q5VUR7 823 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 ZNF324BQ6AW86 544 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 PLD3Q8IV08 490 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 CCDC60Q8IWA6 550 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 SAMD14Q8IZD0 417 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 SLC39A11Q8N1S5 342 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 OR2T12Q8NG77 320 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 GRHL3Q8TE85 626 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 GRK7Q8WTQ7 553 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 UBE2Q2Q8WVN8 375 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 CRYGNQ8WXF5 182 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 PROX1Q92786 737 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 FUT8Q9BYC5 575 aa5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 MMADHCQ9H3L0 296 aaPredicted RBP5.15□□□□□ -1.59
RNU4-39P-201ENST00000362455 Q9H8V8 135 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms