RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 OR4N4Q8N0Y3 316 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ARRDC2Q8TBH0 407 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 METTL2AQ96IZ6 378 aaKnown RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ACBD6Q9BR61 282 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 TRIM62Q9BVG3 475 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 BRD7Q9NPI1 651 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 FCF1Q9Y324 198 aaKnown RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 SPIN1Q9Y657 262 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ZFP37Q9Y6Q3 630 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 SYNDIG1LA6NDD5 238 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 MTX2O75431 263 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 NCR1O76036 304 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 PRAMEF1O95521 474 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 GBAP04062 536 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ARSBP15848 533 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 GGT2P36268 569 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 NNMTP40261 264 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 RHOAP61586 193 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 LDLRAD1Q5T700 205 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 TRIM69Q86WT6 500 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 KIF18BQ86Y91 864 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 CLECL1Q8IZS7 167 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 MDGA1Q8NFP4 955 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 MTERF1Q99551 399 aaKnown RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 RTP3Q9BQQ7 232 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-201ENST00000361716 HEBP1Q9NRV9 189 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 MAPRE3Q9UPY8 281 aa12.22□□□□□ -0.45
VAMP1-201ENST00000361716 J3KTA2 159 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 MGAMO43451 1857 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 ACSL4O60488 711 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 PROS1P07225 676 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 MMP2P08253 660 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 PSPHP78330 225 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 LARS2Q15031 903 aaKnown RBP12.21□□□□□ -0.45
VAMP1-201ENST00000361716 P2RY14Q15391 338 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 SSX1Q16384 188 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 IQCCQ4KMZ1 466 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 TMEM65Q6PI78 240 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 ADGRD2Q7Z7M1 963 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 MON1AQ86VX9 555 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF280BQ86YH2 543 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 CPA6Q8N4T0 437 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 TCF25Q9BQ70 676 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 MRM3Q9HC36 420 aaKnown RBP12.21□□□□□ -0.45
VAMP1-201ENST00000361716 STOML2Q9UJZ1 356 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 A3GALT2U3KPV4 340 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 GON4LQ3T8J9 2241 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 PRR23AA6NEV1 266 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 LYRM1O43325 122 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 EPB42P16452 691 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 AVPR1BP47901 424 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 ABHD18Q0P651 414 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.458e-7■■■□□ 14.9
VAMP1-201ENST00000361716 EXOC3L2Q2M3D2 409 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 LEXMQ3ZCV2 418 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 TOR1AIP1Q5JTV8 583 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 ZNF382Q96SR6 550 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 ARHGAP39Q9C0H5 1083 aa12.21□□□□□ -0.45
VAMP1-201ENST00000361716 FAM124BQ9H5Z6 455 aaPredicted RBP12.21□□□□□ -0.45
VAMP1-201ENST00000361716 TEX51A0A1B0GUA7 166 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 SHOXO15266 292 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 PLA2G10O15496 165 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 MTRF1O75570 445 aaKnown RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 RFPL3O75679 317 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 COX7A2P14406 83 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 RPL17P18621 184 aaKnown RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 KELP23276 732 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 TTPAP49638 278 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 DCDC1P59894 354 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 RRAS2P62070 204 aaPredicted RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 MRPS6P82932 125 aaKnown RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 CSTF1Q05048 431 aaKnown RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 MGAT3Q09327 533 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 C1DQ13901 141 aaKnown RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 SPHARQ15513 63 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 ZBTB37Q5TC79 503 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 RNF219Q5W0B1 726 aaPredicted RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 BHLHA9Q7RTU4 235 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 SYT12Q8IV01 421 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 DNAJA4Q8WW22 397 aaPredicted RBP12.21□□□□□ -0.46
VAMP1-201ENST00000361716 MED8Q96G25 268 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 HRASLS5Q96KN8 279 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 B3GNT2Q9NY97 397 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 ATPIF1Q9UII2 106 aa12.21□□□□□ -0.46
VAMP1-201ENST00000361716 NUMA1Q14980 2115 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 FAM220BPB1ANY3 271 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 HPGDSO60760 199 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 ACPPP15309 386 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CNR2P34972 360 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 RPL34P49207 117 aaKnown RBP12.2□□□□□ -0.46
VAMP1-201ENST00000361716 CSNK2BP67870 215 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 BCL2L1Q07817 233 aa12.2□□□□□ -0.46
VAMP1-201ENST00000361716 RGS1Q08116 209 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms