RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 MGAT4AQ9UM21 535 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ALG5Q9Y673 324 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 PCDH17O14917 1159 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 SF1Q15637 639 aaKnown RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 SNAP47Q5SQN1 464 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 FAM217AQ8IXS0 508 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ADGRG2Q8IZP9 1017 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 CLDN19Q8N6F1 224 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 C7orf57Q8NEG2 295 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 BHLHE41Q9C0J9 482 aaPredicted RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 OR51E2Q9H255 320 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 DCAF13Q9NV06 445 aaKnown RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 C14orf105Q9NVL8 296 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 HCN3Q9P1Z3 774 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 NLKQ9UBE8 527 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 PI15O43692 258 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 MLLT10P55197 1068 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 CLDN8P56748 225 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 TAS2R50P59544 299 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 PRKCDQ05655 676 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ZNF534Q76KX8 674 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 GPRIN1Q7Z2K8 1008 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 GALNT13Q8IUC8 556 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 PSD4Q8NDX1 1056 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 TOR1AIP2Q8NFQ8 470 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 C2orf15Q8WU43 125 aaKnown RBP13.46□□□□□ -0.25
SMC5-201ENST00000361138 ZNF558Q96NG5 402 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 FEVQ99581 238 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 TREM1Q9NP99 234 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 ERVW-1Q9UQF0 538 aa13.46□□□□□ -0.25
SMC5-201ENST00000361138 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 MCIDASD6RGH6 385 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 CHRNB1P11230 501 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 KCNC3Q14003 757 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 LRRC73Q5JTD7 316 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 OSTF1Q92882 214 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 ZNF354BQ96LW1 612 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 EPYCQ99645 322 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 ACOT13Q9NPJ3 140 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 GPR45Q9Y5Y3 372 aa13.46□□□□□ -0.26
SMC5-201ENST00000361138 A0A0G2JLL6 359 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 A0A1W2PQL4 384 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 MEIOCA2RUB1 952 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ALPLP05186 524 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 UQCRC2P22695 453 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ADAM8P78325 824 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 FBXO42Q6P3S6 717 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 CHST9Q7L1S5 443 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 PRRT2Q7Z6L0 340 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 NUDT13Q86X67 352 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ZNF615Q8N8J6 731 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ZNF548Q8NEK5 533 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 WRAP53Q9BUR4 548 aaKnown RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 ZCCHC3Q9NUD5 404 aaKnown RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 NUDT15Q9NV35 164 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 CLDN24A6NM45 220 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 MTRF1O75570 445 aaKnown RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 NT5EP21589 574 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ST3GAL3Q11203 375 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 ZNF789Q5FWF6 425 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 HAGHLQ6PII5 290 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 SLC24A5Q71RS6 500 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 NR4A3Q92570 626 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 SCRN2Q96FV2 425 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 SEC14L2O76054 403 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 RHCEP18577 417 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 DDX6P26196 483 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMC5-201ENST00000361138 CXCR4P61073 352 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 EIF4HQ15056 248 aaKnown RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 MSANTD1Q6ZTZ1 278 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 MCCC1Q96RQ3 725 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 ACTR6Q9GZN1 396 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 NEUROD4Q9HD90 331 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 C5orf51A6NDU8 294 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 XKRYO14609 159 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 RGS9O75916 674 aaPredicted RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 MT-ND5P03915 603 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 PFKMP08237 780 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 MAGEA3P43357 314 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 LIPJQ5W064 366 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 PLCZ1Q86YW0 608 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 METTL4Q8N3J2 472 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 DENND6BQ8NEG7 585 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 RPLP0P6Q8NHW5 317 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ZNF563Q8TA94 476 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 SUSD3Q96L08 255 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ALDOCP09972 364 aaKnown RBP13.45□□□□□ -0.26
SMC5-201ENST00000361138 HSDL2Q6YN16 418 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ZNF627Q7L945 461 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 CLEC14AQ86T13 490 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
SMC5-201ENST00000361138 ELL3Q9HB65 397 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms