RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 CLPPQ16740 277 aaPredicted RBP20.79■□□□□ 0.92
HOXA4-201ENST00000360046 LACTB2Q53H82 288 aaPredicted RBP20.79■□□□□ 0.92
HOXA4-201ENST00000360046 BLOC1S3Q6QNY0 202 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 TMEM132CQ8N3T6 1108 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 RCBTB1Q8NDN9 531 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 C16orf78Q8WTQ4 265 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 CCDC74BQ96LY2 380 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 PRDM7Q9NQW5 492 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 TMEM45AQ9NWC5 275 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 ADAMTS20P59510 1910 aa20.79■□□□□ 0.92
HOXA4-201ENST00000360046 AGRPO00253 132 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 ANKRD34CP0C6C1 535 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 PRPS1L1P21108 318 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 ATP5A1P25705 553 aaKnown RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 CERS1P27544 350 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TSFMP43897 325 aaKnown RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 ZFP36L2P47974 494 aaKnown RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 MNAT1P51948 309 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 GPR19Q15760 415 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 MMEL1Q495T6 779 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 VPS26BQ4G0F5 336 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 DEFB134Q4QY38 66 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TIGD2Q4W5G0 525 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 PHF19Q5T6S3 580 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TMEM214Q6NUQ4 689 aaKnown RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 AMER3Q8N944 861 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 ACOT4Q8N9L9 421 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 GLB1L3Q8NCI6 653 aaPredicted RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 SPDL1Q96EA4 605 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TMEM74Q96NL1 305 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 CLMPQ9H6B4 373 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 MYNNQ9NPC7 610 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 PDP2Q9P2J9 529 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 MRPS2Q9Y399 296 aaKnown RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 A0A0A6YYD5 115 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TMEM150CB9EJG8 249 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 NTN3O00634 580 aaPredicted RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TMPRSS11DO60235 418 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 KLHL18O94889 574 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 SPTBP11277 2137 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 CAPN3P20807 821 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 HPCAL1P37235 193 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 SNRPNP63162 240 aaKnown RBP20.78■□□□□ 0.92
HOXA4-201ENST00000360046 FAM174BQ3ZCQ3 159 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 TCTE1Q5JU00 501 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 VPS33AQ96AX1 596 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 RCN3Q96D15 328 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 ROGDIQ9GZN7 287 aa20.78■□□□□ 0.92
HOXA4-201ENST00000360046 A0A088AWK7 358 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 CCDC154A6NI56 674 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 AIM2O14862 343 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 ANGPT2O15123 496 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 PRMT3O60678 531 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 IL3P08700 152 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 FOLR1P15328 257 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 ALOX12P18054 663 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF10P21506 573 aaPredicted RBP20.77■□□□□ 0.92
HOXA4-201ENST00000360046 DGKQP52824 942 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 STX5Q13190 355 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 SLAMF1Q13291 335 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 SLC9A5Q14940 896 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 PRTGQ2VWP7 1150 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 ARHGAP22Q7Z5H3 698 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 RIMKLAQ8IXN7 391 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 ZNF285Q96NJ3 590 aa20.77■□□□□ 0.92
HOXA4-201ENST00000360046 B2RBV5 119 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 HNRNPCL1O60812 293 aaKnown RBP20.76■□□□□ 0.91
HOXA4-201ENST00000360046 COX7A2P14406 83 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 IL1RNP18510 177 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 RASSF2P50749 326 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 MTTPP55157 894 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 C2orf80Q0P641 193 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 TRIP6Q15654 476 aaKnown RBP20.76■□□□□ 0.91
HOXA4-201ENST00000360046 PGS1Q32NB8 556 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 SPANXN4Q5MJ08 99 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 IKBIPQ70UQ0 350 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 PIP4P1Q86T03 277 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 KIAA2013Q8IYS2 634 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 ZCCHC7Q8N3Z6 543 aaKnown RBP20.76■□□□□ 0.91
HOXA4-201ENST00000360046 DEFB124Q8NES8 71 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 STARD8Q92502 1023 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 NPAS2Q99743 824 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 SPRTNQ9H040 489 aaPredicted RBP20.76■□□□□ 0.91
HOXA4-201ENST00000360046 FANCEQ9HB96 536 aa20.76■□□□□ 0.91
HOXA4-201ENST00000360046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.76■□□□□ 0.91
HOXA4-201ENST00000360046 SCAMP2O15127 329 aaKnown RBP20.75■□□□□ 0.91
HOXA4-201ENST00000360046 OR2B3O76000 313 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 FAM58BPP0C7Q3 252 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 SMIM10L1P0DMW3 83 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 NCALDP61601 193 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 SLITRK4Q8IW52 837 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 OR7A2PQ8NGA2 310 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.75■□□□□ 0.91
HOXA4-201ENST00000360046 TESCQ96BS2 214 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 SMIM10Q96HG1 83 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 RTKNQ9BST9 563 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 FGF21Q9NSA1 209 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 MAPRE3Q9UPY8 281 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 NDUFAF1Q9Y375 327 aa20.75■□□□□ 0.91
HOXA4-201ENST00000360046 SLC22A7Q9Y694 548 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms