RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 KCNH1O95259 989 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC35G6P0C7Q6 338 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 ZNF883P0CG24 379 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 PVRP15151 417 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 ENGP17813 658 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 DDX5P17844 614 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 TPP2P29144 1249 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 HNRNPH1P31943 449 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 BSGP35613 385 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 SSR2P43308 183 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 MAPK12P53778 367 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 PWP1Q13610 501 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 SUZ12Q15022 739 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 MAPKAPK3Q16644 382 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 UGT8Q16880 541 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 PGS1Q32NB8 556 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 ADPRMQ3LIE5 342 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 PAGE3Q5JUK9 113 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 WASHC2DQ5SRD0 308 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 CCNYL2Q5T2Q4 361 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 IRGCQ6NXR0 463 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 C8orf82Q6P1X6 216 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 TRIM40Q6P9F5 258 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 PGM2L1Q6PCE3 622 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC2A7Q6PXP3 512 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 KANSL1Q7Z3B3 1105 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 NET1Q7Z628 596 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 GPR180Q86V85 440 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 TMEM132CQ8N3T6 1108 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 FBXW8Q8N3Y1 598 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 MINDY1Q8N5J2 469 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 OR4C6Q8NH72 309 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 DNAJB8Q8NHS0 232 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 C16orf78Q8WTQ4 265 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 GFM2Q969S9 779 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 CDRT15Q96T59 188 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 ZFYVE21Q9BQ24 234 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 REXO4Q9GZR2 422 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 IL1RL2Q9HB29 575 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 FAM120CQ9NX05 1096 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 PILRAQ9UKJ1 303 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 RNF215Q9Y6U7 377 aa13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 GOLGA4Q13439 2230 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-203ENST00000359265 A0A0J9YVX5 310 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 FXYD1O00168 92 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 TRIM38O00635 465 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ERI3O43414 337 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 NUDT21O43809 227 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 RASSF9O75901 435 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 PDE5AO76074 875 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 GIMD1P0DJR0 217 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 GLB1P16278 677 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 TSFMP43897 325 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 LSSP48449 732 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 MTTPP55157 894 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 PPP1CAP62136 330 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 PIGGQ5H8A4 983 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 SAMD4BQ5PRF9 694 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 C6orf10Q5SRN2 563 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 OR4C11Q6IEV9 310 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 CYB5D1Q6P9G0 228 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ZNF438Q7Z4V0 828 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 VN1R4Q7Z5H5 301 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 CAMKMTQ7Z624 323 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 GATAD2AQ86YP4 633 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC35F3Q8IY50 421 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ZNF655Q8N720 491 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 C19orf47Q8N9M1 422 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 CAMKVQ8NCB2 501 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 OR2L5Q8NG80 312 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 GAL3ST3Q96A11 431 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 RERGQ96A58 199 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 MS4A6EQ96DS6 147 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 MTERF3Q96E29 417 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ITCHQ96J02 903 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 KCNC2Q96PR1 638 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 CD180Q99467 661 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 SORBS1Q9BX66 1292 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ZNF717Q9BY31 904 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC6A16Q9GZN6 736 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 RAB33BQ9H082 229 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 KLHL25Q9H0H3 589 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 REEP4Q9H6H4 257 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 DDX31Q9H8H2 851 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 IL21RQ9HBE5 538 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 C1GALT1Q9NS00 363 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ATAD3AQ9NVI7 634 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 LRIT1Q9P2V4 623 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 ATP6V1HQ9UI12 483 aa13.18□□□□□ -0.3
PDLIM5-203ENST00000359265 CABIN1Q9Y6J0 2220 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms