RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 EXOC3L2Q2M3D2 409 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 HNRNPA1L2Q32P51 320 aaKnown RBP10.73□□□□□ -0.69
SSU72-202ENST00000359060 C16orf62Q7Z3J2 963 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 TMEM179BQ7Z7N9 219 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 NUDT13Q86X67 352 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 CXorf40BQ96DE9 158 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 C1QTNF7Q9BXJ2 289 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
SSU72-202ENST00000359060 TMEM245Q9H330 911 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 BTBD3Q9Y2F9 522 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 M0R129 80 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 MYL12BO14950 172 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 CCDC159P0C7I6 412 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 TGM3Q08188 693 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 CCDC85BQ15834 202 aaPredicted RBP10.73□□□□□ -0.69
SSU72-202ENST00000359060 TIGD6Q17RP2 521 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 MSANTD1Q6ZTZ1 278 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 ARMC8Q8IUR7 673 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 NRSN1Q8IZ57 195 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 JPH3Q8WXH2 748 aaPredicted RBP10.73□□□□□ -0.69
SSU72-202ENST00000359060 UBE2FQ969M7 185 aa10.73□□□□□ -0.69
SSU72-202ENST00000359060 A0A0J9YVX5 310 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 GUCY1B2O75343 617 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 ETHE1O95571 254 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 CTSLP07711 333 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 MOGQ16653 247 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 ZNF630Q2M218 657 aaPredicted RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 TMEM236Q5W0B7 351 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 TMEM215Q68D42 235 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 CCDC103Q8IW40 242 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 FAM20CQ8IXL6 584 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 GPR65Q8IYL9 337 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 NXPE3Q969Y0 559 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 ARRDC3Q96B67 414 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 COX4I2Q96KJ9 171 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 DMRT3Q9NQL9 472 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 ERGIC3Q9Y282 383 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 RWDD3Q9Y3V2 267 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 GSAPA4D1B5 854 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 MID1O15344 667 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 PSIP1O75475 530 aaKnown RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 ITGB8P26012 769 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 NCBP2P52298 156 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSU72-202ENST00000359060 TARDBPQ13148 414 aaKnown RBP eCLIP10.72□□□□□ -0.695e-10■□□□□ 10.2
SSU72-202ENST00000359060 KIAA0040Q15053 153 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 SPANXN2Q5MJ10 180 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 SLCO4C1Q6ZQN7 724 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSU72-202ENST00000359060 ZNF513Q8N8E2 541 aaPredicted RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 OR9Q2Q8NGE9 314 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 SPPL3Q8TCT6 385 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 RGMAQ96B86 450 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 SLC35G5Q96KT7 338 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 ALPK1Q96QP1 1244 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 BRF2Q9HAW0 419 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 TRNAU1APQ9NX07 287 aaKnown RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 FBXL12Q9NXK8 326 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 VWA8A3KMH1 1905 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 GRXCR1A8MXD5 290 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 H0YIV9 168 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 ZW10O43264 779 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 CBFA2T3O75081 653 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 MED26O95402 600 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 LCKP06239 509 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 MYOGP15173 224 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 PSMB5P28074 263 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 CCT3P49368 545 aaKnown RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 TMED10P49755 219 aaKnown RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 DAPP51397 102 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 TAP2Q03519 686 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 CARTPTQ16568 116 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 SLC5A12Q1EHB4 618 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 LRIF1Q5T3J3 769 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 REEP3Q6NUK4 255 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 LILRA6Q6PI73 481 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 CBLL1Q75N03 491 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 POC5Q8NA72 575 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 SMARCD2Q92925 531 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 FAM129BQ96TA1 746 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 BARD1Q99728 777 aaKnown RBP10.72□□□□□ -0.69
SSU72-202ENST00000359060 SLC52A3Q9NQ40 469 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 POFUT2Q9Y2G5 429 aa10.72□□□□□ -0.69
SSU72-202ENST00000359060 BCAS1O75363 584 aaPredicted RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 NME6O75414 186 aaPredicted RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 KAT7O95251 611 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 CDH3P22223 829 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 NCS1P62166 190 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 PPP2R2BQ00005 443 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 LRRC32Q14392 662 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 OR8J2Q8NGG1 315 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 ZCCHC10Q8TBK6 192 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 MACROD1Q9BQ69 325 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 BHLHE41Q9C0J9 482 aaPredicted RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 WDR12Q9GZL7 423 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 POLR2J3Q9H1A7 115 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 MRPS30Q9NP92 439 aaKnown RBP10.71□□□□□ -0.69
SSU72-202ENST00000359060 ASIC5Q9NY37 505 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 TMPRSS11EQ9UL52 423 aa10.71□□□□□ -0.69
SSU72-202ENST00000359060 MAN2B2Q9Y2E5 1009 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms