RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MC1RQ01726 317 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 TEAD2Q15562 447 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 RTP2Q5QGT7 225 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 CLECL1Q8IZS7 167 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 CD180Q99467 661 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 TRIM36Q9NQ86 728 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ACSL6Q9UKU0 697 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 GRIP1Q9Y3R0 1128 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 FBP2O00757 339 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ENTPD6O75354 484 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 GABBR2O75899 941 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 RPP14O95059 124 aaKnown RBP13.22□□□□□ -0.29
VCP-201ENST00000358901 SOD2P04179 222 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 DBIP07108 87 aaKnown RBP13.22□□□□□ -0.29
VCP-201ENST00000358901 IL3P08700 152 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ZNF3P17036 446 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 OXTRP30559 389 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 CLCN7P51798 805 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 MLLT10P55197 1068 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 OR12D2P58182 307 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 TSPAN5P62079 268 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.292e-7■■□□□ 12.1
VCP-201ENST00000358901 SLC36A3Q495N2 470 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 GALNTL5Q7Z4T8 443 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 HMGN2P46Q86SG4 172 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 CCDC36Q8IYA8 594 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 LRRC20Q8TCA0 184 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 NDC1Q9BTX1 674 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 BTBD1Q9H0C5 482 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 BRD7Q9NPI1 651 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ZDHHC7Q9NXF8 308 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 MYH1P12882 1939 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 C1GALT1C1LP0DN25 315 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 JUPP14923 745 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ATF6P18850 670 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 BMXP51813 675 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 RBBP4Q09028 425 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 KCNC3Q14003 757 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 OR4E2Q8NGC2 313 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 NEK7Q8TDX7 302 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 GABRQQ9UN88 632 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 WDR37Q9Y2I8 494 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 HEBP2Q9Y5Z4 205 aa13.22□□□□□ -0.29
VCP-201ENST00000358901 ELOA3DA6NLF2 546 aaPredicted RBP13.21□□□□□ -0.29
VCP-201ENST00000358901 GNAO1P09471 354 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 CLCN2P51788 898 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 PPP3R1P63098 170 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 SMCO1Q147U7 214 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ELOA3BQ3SY89 546 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ZSWIM9Q86XI8 627 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 PIANPQ8IYJ0 282 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 CCDC116Q8IYX3 515 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 HS3ST5Q8IZT8 346 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ELOA3Q8NG57 546 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 TMEM125Q96AQ2 219 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 C3orf30Q96M34 536 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
VCP-201ENST00000358901 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 BHLHE41Q9C0J9 482 aaPredicted RBP13.21□□□□□ -0.29
VCP-201ENST00000358901 PIGUQ9H490 435 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 DLGAP1O14490 977 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 AGR2O95994 175 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ETFAP13804 333 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 BMP8BP34820 402 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 DCTP40126 519 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 FADDQ13158 208 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 BMP8AQ7Z5Y6 402 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 SLC15A4Q8N697 577 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 OR51G2Q8NGK0 314 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 IRF7Q92985 503 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 SLC38A3Q99624 504 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 MCHR1Q99705 422 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 LHPPQ9H008 270 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
VCP-201ENST00000358901 MYADML2A6NDP7 307 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 UNCXA6NJT0 531 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 B4GAT1O43505 415 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 ARL6IP5O75915 188 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 OAZ2O95190 189 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 ZNF823P16415 610 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 GPX3P22352 226 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 GSTM2P28161 218 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 ARCN1P48444 511 aaKnown RBP13.21□□□□□ -0.3
VCP-201ENST00000358901 RPS26P62854 115 aaKnown RBP13.21□□□□□ -0.3
VCP-201ENST00000358901 MAB21L1Q13394 359 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 ADAM15Q13444 863 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 GRASPQ7Z6J2 395 aaPredicted RBP13.21□□□□□ -0.3
VCP-201ENST00000358901 TSPAN33Q86UF1 283 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 OR56A1Q8NGH5 318 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 TMEM174Q8WUU8 243 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms