RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 EIPR1Q53HC9 387 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 NOMO2Q5JPE7 1267 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FAM171BQ6P995 826 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TSPYL5Q86VY4 417 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PCNPQ8WW12 178 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 PARK7Q99497 189 aaKnown RBP5.88□□□□□ -1.47
VPS13B-203ENST00000358544 SLC30A3Q99726 388 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TAS2R10Q9NYW0 307 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FKBPLQ9UIM3 349 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 FBXL3Q9UKT7 428 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 TLR6Q9Y2C9 796 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 HRH3Q9Y5N1 445 aa5.88□□□□□ -1.47
VPS13B-203ENST00000358544 A0A1W2PQL4 384 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CASTOR2A6NHX0 329 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MATN4O95460 622 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TGFB3P10600 412 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 DDCP20711 480 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CAPN3P20807 821 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ACVR2AP27037 513 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 KCNQ1P51787 676 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 METTL2BQ6P1Q9 378 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 C16orf59Q7L2K0 433 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 PGBD3Q8N328 593 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LINC00116Q8NCU8 138 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ESAMQ96AP7 390 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 COQ8BQ96D53 544 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 HACL1Q9UJ83 578 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FZD10Q9ULW2 581 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 RNF11Q9Y3C5 154 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ABCA11PQ4W5N1 156 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SLC27A1Q6PCB7 646 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 OOSP2Q86WS3 158 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 EMID1Q96A84 441 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 EXOSC8Q96B26 276 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CLIP3Q96DZ5 547 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 DERL2Q9GZP9 239 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TMX2Q9Y320 296 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LAMA4Q16363 1823 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 DIRAS1O95057 198 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SRCP12931 536 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 BDNFP23560 247 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TGM4P49221 684 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF132P52740 706 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 GINS1Q14691 196 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LARS2Q15031 903 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SMUG1Q53HV7 270 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 RANBP3LQ86VV4 465 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LYSMD2Q8IV50 215 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 POGLUT1Q8NBL1 392 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ZFAND1Q8TCF1 268 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 C13orf42A0A1B0GVH6 325 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 PRRG1O14668 218 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 VNN2O95498 520 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MANFP55145 182 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 BIKQ13323 160 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 FAM209AQ5JX71 171 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SENP8Q96LD8 212 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 OSGEPL1Q9H4B0 414 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 C12orf10Q9HB07 376 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MRM3Q9HC36 420 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 POLLQ9UGP5 575 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 COPS3Q9UNS2 423 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 GCAP28676 217 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TNFSF8P32971 234 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MAPK8P45983 427 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 RAP2BP61225 183 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 EVX2Q03828 476 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CDK5R2Q13319 367 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 RAB41Q5JT25 222 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TOR2AQ5JU69 321 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CORO6Q6QEF8 472 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TRMT11Q7Z4G4 463 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF227Q86WZ6 799 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 DDX1Q92499 740 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TBX5Q99593 518 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MYOCQ99972 504 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 C17orf62Q9BQA9 187 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SDR39U1Q9NRG7 319 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 COQ4Q9Y3A0 265 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 PRELID3BQ9Y3B1 194 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CPSF4LA6NMK7 179 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CAPN5O15484 640 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MAFO75444 373 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 GABARAPO95166 117 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 NFYAP23511 347 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MMP12P39900 470 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 MLLT10P55197 1068 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CAPSQ13938 189 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SLC35G1Q2M3R5 365 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 GOLGA7Q7Z5G4 137 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 CCDC71Q8IV32 467 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 DTWD1Q8N5C7 304 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 NFKBIDQ8NI38 313 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 RIOK2Q9BVS4 552 aaKnown RBP5.87□□□□□ -1.47
VPS13B-203ENST00000358544 OR51E2Q9H255 320 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM45AQ9NWC5 275 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 ABHD14A-ACY1A0A1B0GW23 586 aa5.87□□□□□ -1.47
VPS13B-203ENST00000358544 SOX3P41225 446 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms