RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SLC46A3Q7Z3Q1 461 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TRIM46Q7Z4K8 759 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 DNAJB7Q7Z6W7 309 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 LAX1Q8IWV1 398 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 TRPV1Q8NER1 839 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PLD4Q96BZ4 506 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SCLYQ96I15 445 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 CDADC1Q9BWV3 514 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 SERHLQ9NQF3 203 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PLSCR3Q9NRY6 295 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 H2AFY2Q9P0M6 372 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 LHX3Q9UBR4 397 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF282Q9UDV7 671 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-203ENST00000358528 PSORS1C1Q9UIG5 152 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 N6AMT1Q9Y5N5 214 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 HSPE1-MOB4S4R3N1 261 aa6.32□□□□□ -1.4
CSDE1-203ENST00000358528 MYLKQ15746 1914 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TRAV19A0A0A6YYK7 116 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 A0A1W2PQ09 198 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 NEDD8-MDP1E9PL57 170 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 M0R082 166 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 RTCAO00442 366 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ARHGAP33O14559 1287 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 NME6O75414 186 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 EOMESO95936 686 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 NR2F6P10588 404 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CR2P20023 1033 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CD72P21854 359 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 HOXA9P31269 272 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 RFX3P48380 749 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 XKP51811 444 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 PRKCZQ05513 592 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 FBXO43Q4G163 708 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 MORN1Q5T089 497 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 MED27Q6P2C8 311 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM220Q6QAJ8 160 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CRTC1Q6UUV9 634 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CEACAM20Q6UY09 585 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 KRT74Q7RTS7 529 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SERPINA11Q86U17 422 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 RTN4RL1Q86UN2 441 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 OR2AP1Q8NGE2 309 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 HUS1BQ8NHY5 278 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 KAT2AQ92830 837 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ARMC5Q96C12 935 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CTRCQ99895 268 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 RIOK2Q9BVS4 552 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SORBS1Q9BX66 1292 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 MTG2Q9H4K7 406 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TRIM45Q9H8W5 580 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 RANGRFQ9HD47 186 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF624Q9P2J8 865 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CLEC2DQ9UHP7 191 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 PLAGL1Q9UM63 463 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CFAP20Q9Y6A4 193 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ENTPD6O75354 484 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 AOAHP28039 575 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CD6P30203 668 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CD70P32970 193 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 RPS7P62081 194 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 MLLT1Q03111 559 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 MTA1Q13330 715 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 GAB1Q13480 694 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 EIF4EBP2Q13542 120 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 KIAA0040Q15053 153 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SPHARQ15513 63 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TBCEQ15813 527 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CCSMST1Q4G0I0 132 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 NXNL2Q5VZ03 156 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CXorf57Q6NSI4 855 aaKnown RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TUBA3EQ6PEY2 450 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TPRG1Q6ZUI0 275 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ASB18Q6ZVZ8 466 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 OTOP2Q7RTS6 562 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 LAPTM4BQ86VI4 370 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CADM2Q8N3J6 435 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 KLHL6Q8WZ60 621 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 EFHD2Q96C19 240 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 FNDC11Q9BVV2 318 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 EQTNQ9NQ60 294 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CCDC177Q9NQR7 707 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 UCKL1Q9NWZ5 548 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 OSGIN1Q9UJX0 560 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF222Q9UK12 451 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SLC6A14Q9UN76 642 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CCDC88CQ9P219 2028 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 KMOO15229 486 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SEPT4O43236 478 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 TSPAN6O43657 245 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SLC16A8O95907 504 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 JUPP14923 745 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 JUNDP17535 347 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 CSTF2P33240 577 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSDE1-203ENST00000358528 ETV3P41162 512 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 SELENOWP63302 87 aa6.31□□□□□ -1.4
CSDE1-203ENST00000358528 HBA1P69905 142 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms