RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 C22orf39Q6P5X5 142 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 UNC5DQ6UXZ4 953 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.98■□□□□ 0.313e-47■□□□□ 9.6
RTN4-204ENST00000357732 ERLEC1Q96DZ1 483 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 SNX18Q96RF0 628 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 SLC35A5Q9BS91 424 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 C1GALT1Q9NS00 363 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 FTSJ1Q9UET6 329 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 PCDHGB2Q9Y5G2 931 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 ENPP4Q9Y6X5 453 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 FOXE1O00358 373 aaPredicted RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 SCG5P05408 212 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 PRIM2P49643 509 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 EPHB3P54753 998 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 BBS7Q8IWZ6 715 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 FAM46DQ8NEK8 389 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 FAM129BQ96TA1 746 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 FBXL12Q9NXK8 326 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 NDOR1Q9UHB4 597 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 ZNF221Q9UK13 617 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 ANGPT4Q9Y264 503 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 ZNF197O14709 1029 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 GADD45GO95257 159 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 KRT75O95678 551 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 TRAPPC2P0DI81 140 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 TRAPPC2BP0DI82 140 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 ETFAP13804 333 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 PCBP3P57721 371 aaKnown RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 SNRPGP62308 76 aaKnown RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 CDK6Q00534 326 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 DMC1Q14565 340 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 SF3B4Q15427 424 aaKnown RBP eCLIP16.97■□□□□ 0.319e-8■■■□□ 17.1
RTN4-204ENST00000357732 RSBN1Q5VWQ0 802 aaPredicted RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 MED27Q6P2C8 311 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 ARL14EPQ8N8R7 260 aaPredicted RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 IL17RCQ8NAC3 791 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 HUS1BQ8NHY5 278 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 WDFY2Q96P53 400 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 FZD3Q9NPG1 666 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 MBD1Q9UIS9 605 aaPredicted RBP16.97■□□□□ 0.31
RTN4-204ENST00000357732 KCND3Q9UK17 655 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 KCNE2Q9Y6J6 123 aa16.97■□□□□ 0.31
RTN4-204ENST00000357732 SLC35F4A4IF30 521 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 FADS2P1A8MWK0 482 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 PSMD11O00231 422 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 GPR37L1O60883 481 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 ETHE1O95571 254 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 HSMCR30P0CW71 290 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 ZNF24P17028 368 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 CRISP1P54107 249 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 HBA1P69905 142 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 IFITM2Q01629 132 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 NAE1Q13564 534 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 MED22Q15528 200 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.96■□□□□ 0.31
RTN4-204ENST00000357732 ANGPTL8Q6UXH0 198 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 SERPINA13PQ6UXR4 307 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 PTCHD4Q6ZW05 846 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 WDR34Q96EX3 536 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 SDHCQ99643 169 aaPredicted RBP16.96■□□□□ 0.31
RTN4-204ENST00000357732 ASAH2Q9NR71 780 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 B4GALT6Q9UBX8 382 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 MAFFQ9ULX9 164 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 DSPPQ9NZW4 1301 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 ARHGAP33O14559 1287 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 CAPN5O15484 640 aaPredicted RBP16.96■□□□□ 0.31
RTN4-204ENST00000357732 SGTAO43765 313 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 ADAP00813 363 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 ARAFP10398 606 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 CYP2A6P11509 494 aaPredicted RBP16.96■□□□□ 0.31
RTN4-204ENST00000357732 CD70P32970 193 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 BMPR1AP36894 532 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 HTR3AP46098 478 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 TSTQ16762 297 aaKnown RBP16.96■□□□□ 0.31
RTN4-204ENST00000357732 TMEM201Q5SNT2 666 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 FRMPD2BQ6IN97 320 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 TMC5Q6UXY8 1006 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 UBQLNLQ8IYU4 475 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 OR52J3Q8NH60 311 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 NFKBIDQ8NI38 313 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 IGSF21Q96ID5 467 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 OR4K3Q96R72 315 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 SMURF1Q9HCE7 757 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 MYNNQ9NPC7 610 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 SEC14L4Q9UDX3 406 aa16.96■□□□□ 0.31
RTN4-204ENST00000357732 EXO1Q9UQ84 846 aaKnown RBP16.96■□□□□ 0.31
RTN4-204ENST00000357732 ALPK3Q96L96 1907 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 CACNB4O00305 520 aaPredicted RBP16.95■□□□□ 0.3
RTN4-204ENST00000357732 CSTF2P33240 577 aaKnown RBP eCLIP16.95■□□□□ 0.3
RTN4-204ENST00000357732 OR2B6P58173 313 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 COX20Q5RI15 118 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 LHX8Q68G74 356 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 RFLNAQ6ZTI6 216 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 TRAM1L1Q8N609 369 aa16.95■□□□□ 0.3
RTN4-204ENST00000357732 FBXO15Q8NCQ5 510 aaPredicted RBP16.95■□□□□ 0.3
RTN4-204ENST00000357732 OR9Q2Q8NGE9 314 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms