RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SLC35G6P0C7Q6 338 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 CKMT1AP12532 417 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 TAS2R50P59544 299 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 RAB8AP61006 207 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 DPY19L1Q2PZI1 675 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 TRMT5Q32P41 509 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 FAM71E1Q6IPT2 247 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 WDR74Q6RFH5 385 aaPredicted RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 DBX2Q6ZNG2 339 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PAGE2Q7Z2X7 111 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 TMPRSS9Q7Z410 1059 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 NUDT13Q86X67 352 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 PLXDC1Q8IUK5 500 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 MCATQ8IVS2 390 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 CAMKVQ8NCB2 501 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 OR7A2PQ8NGA2 310 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 UTP15Q8TED0 518 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 STARD8Q92502 1023 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 RERGQ96A58 199 aaPredicted RBP17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 KCNC2Q96PR1 638 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 CCDC3Q9BQI4 270 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 SEMA5BQ9P283 1151 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 MAPRE3Q9UPY8 281 aa17.26■□□□□ 0.35
SMARCD3-202ENST00000356800 A0A1W2PQM1 296 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 SCAMP2O15127 329 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 EIF2S1P05198 315 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 ZNF888P0CJ79 500 aaPredicted RBP17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 SMIM10L1P0DMW3 83 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 SSR2P43308 183 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 ARFIP1P53367 373 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 VSX2P58304 361 aaPredicted RBP17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 MC1RQ01726 317 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 SQSTM1Q13501 440 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 ANKRD26P1Q6NSI1 321 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 TRIM40Q6P9F5 258 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 SLC2A7Q6PXP3 512 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 MMP21Q8N119 569 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 OR8K5Q8NH50 307 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 WDR60Q8WVS4 1066 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 NAT6Q93015 286 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 GAL3ST3Q96A11 431 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 TM4SF18Q96CE8 201 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 SMIM10Q96HG1 83 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 QRFPRQ96P65 431 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 CHRNA10Q9GZZ6 450 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 TMEM181Q9P2C4 612 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 ATXN7L1Q9ULK2 861 aaPredicted RBP17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 MRPS2Q9Y399 296 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 PCDHGB2Q9Y5G2 931 aa17.25■□□□□ 0.35
SMARCD3-202ENST00000356800 ASCC3Q8N3C0 2202 aaKnown RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 GABRR3A8MPY1 467 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 PDE5AO76074 875 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ZBTB11O95625 1053 aaPredicted RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 IL3P08700 152 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ZNF806P0C7X5 589 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 HIST1H1TP22492 207 aaPredicted RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ATP5A1P25705 553 aaKnown RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 MAPK12P53778 367 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 CCL7P80098 99 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 NFYCQ13952 458 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 COL9A2Q14055 689 aaPredicted RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 PGS1Q32NB8 556 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ZC3H12BQ5HYM0 836 aaKnown RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 C6orf163Q5TEZ5 329 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 MSANTD1Q6ZTZ1 278 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 HPS6Q86YV9 775 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 CARFQ8N187 725 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 CSNK1A1LQ8N752 337 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ACOT4Q8N9L9 421 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ZCCHC10Q8TBK6 192 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 TBCDQ9BTW9 1192 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 STARD5Q9NSY2 213 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 ABCD2Q9UBJ2 740 aa17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 COL5A1P20908 1838 aaPredicted RBP17.24■□□□□ 0.35
SMARCD3-202ENST00000356800 CDX4O14627 284 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PIM1P11309 404 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 COX7A2P14406 83 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 S100A3P33764 101 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 MLLT3P42568 568 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 WNT3P56703 355 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ACTR3P61158 418 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SRSF11Q05519 484 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 C2orf80Q0P641 193 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 CEACAM7Q14002 265 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 KPNB1Q14974 876 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SNAP47Q5SQN1 464 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 TMEM214Q6NUQ4 689 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ZNF574Q6ZN55 896 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 PRR23CQ6ZRP0 262 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 TMEM132CQ8N3T6 1108 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ARHGEF39Q8N4T4 335 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SRFBP1Q8NEF9 429 aaKnown RBP17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 DNAJB8Q8NHS0 232 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 IFI44Q8TCB0 444 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 ZMYND15Q9H091 742 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 RASSF4Q9H2L5 321 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 REEP4Q9H6H4 257 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 RXFP3Q9NSD7 469 aa17.23■□□□□ 0.35
SMARCD3-202ENST00000356800 SOHLH2Q9NX45 425 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms