RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 MMP27Q9H306 513 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 HMX1Q9NP08 348 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 B3GALT1Q9Y5Z6 326 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 CILPO75339 1184 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 RGS9O75916 674 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 RPS17P08708 135 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 GRPRP30550 384 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 TAS2R43P59537 309 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 LRRC32Q14392 662 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 ZNF648Q5T619 568 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 ZNF529Q6P280 563 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 ARHGAP12Q8IWW6 846 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 CLEC4CQ8WTT0 213 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 ZNF696Q9H7X3 374 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 ABI3Q9P2A4 366 aa10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 CFAP20Q9Y6A4 193 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-201ENST00000356183 GMDSO60547 372 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 AMY2BP19961 511 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 FGL1Q08830 312 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 PDGFRLQ15198 375 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 PAQR3Q6TCH7 311 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 EPGNQ6UW88 154 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 GPAT4Q86UL3 456 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ANKRD13BQ86YJ7 626 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 C7orf43Q8WVR3 580 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ACTR3BQ9P1U1 418 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 SRRDQ9UH36 339 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 GTF2IRD1Q9UHL9 959 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 PCDHA2Q9Y5H9 948 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 LCHNA4D1U4 455 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 TXNL1O43396 289 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 BCAS2O75934 225 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 C6orf47O95873 294 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ALPIP09923 528 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 NDST2P52849 883 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 POU4F3Q15319 338 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 PLEKHN1Q494U1 663 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 PTF1AQ7RTS3 328 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 CEACAM19Q7Z692 300 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 C1orf52Q8N6N3 182 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 OR51G2Q8NGK0 314 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 IL31RAQ8NI17 732 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 OXSR1O95747 527 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 TMBIM6P55061 237 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 CTBP2P56545 445 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 NIPAL4Q0D2K0 466 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 AMZ1Q400G9 498 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 SPIN4Q56A73 249 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 DCST2Q5T1A1 773 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 SLC29A4Q7RTT9 530 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 KCNN1Q92952 543 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 FAM83CQ9BQN1 747 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 HEBP2Q9Y5Z4 205 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 UBIAD1Q9Y5Z9 338 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 IL33O95760 270 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 NSG1P42857 185 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 GPX6P59796 221 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 DPY19L3Q6ZPD9 716 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 RNF130Q86XS8 419 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 OR6N2Q8NGY6 317 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 RDH12Q96NR8 316 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 NELL2Q99435 816 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 COL20A1Q9P218 1284 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 TLR6Q9Y2C9 796 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 DERAQ9Y315 318 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 CFL1P23528 166 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ERVK-21P61565 698 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 CDK6Q00534 326 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 CYBRD1Q53TN4 286 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 AKR1C8PQ5T2L2 129 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 TAC4Q86UU9 113 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 LRRC52Q8N7C0 313 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 OR7G2Q8NG99 324 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 OR9I1Q8NGQ6 314 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 ZIM2Q9NZV7 527 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 WDR45Q9Y484 360 aa10.67□□□□□ -0.7
GTF3C1-201ENST00000356183 A8MT66 165 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 KIAA0513O60268 411 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 SNAP29O95721 258 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 ESR1P03372 595 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 DLDP09622 509 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 CLCNKBP51801 687 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 SFRP4Q6FHJ7 346 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 FAM198BQ6UWH4 519 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 SCML4Q8N228 414 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 ELP5Q8TE02 316 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 MYO5BQ9ULV0 1848 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 CIB4A0PJX0 185 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 DUXAA6NLW8 204 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 ZNF850A8MQ14 1090 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 GNB3P16520 340 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 CD34P28906 385 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 GGT5P36269 586 aa10.66□□□□□ -0.7
GTF3C1-201ENST00000356183 NFATC2Q13469 925 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms