RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CNOT3O75175 753 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TOM1L1O75674 476 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TFAP2AP05549 437 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TSPAN8P19075 237 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 UQCRC2P22695 453 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GLRA2P23416 452 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 HLA-FP30511 346 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 HSD17B3P37058 310 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FMO5P49326 533 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ENTPD1P49961 510 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZP1P60852 638 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KLF9Q13886 244 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DPYSQ14117 519 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KRT81Q14533 505 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TRADDQ15628 312 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PPP6R3Q5H9R7 873 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PDSS1Q5T2R2 415 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RIPPLY2Q5TAB7 128 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LIPJQ5W064 366 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NCAPH2Q6IBW4 605 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF425Q6IV72 752 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CCBE1Q6UXH8 406 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM110Q86TL2 294 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ADGRG3Q86Y34 549 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RNF148Q8N7C7 305 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NRACQ8N912 160 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PAPD5Q8NDF8 572 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PSMA8Q8TAA3 256 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CD99L2Q8TCZ2 262 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ATL1Q8WXF7 558 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FCGR1BQ92637 280 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TSACCQ96A04 125 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DEFB118Q96PH6 123 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DCLK3Q9C098 648 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 OR2B2Q9GZK3 357 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PRSS22Q9GZN4 317 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LAT2Q9GZY6 243 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MTIF3Q9H2K0 278 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PCDH9Q9HC56 1237 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RAVER2Q9HCJ3 691 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DDX28Q9NUL7 540 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DDX18Q9NVP1 670 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 KCNJ14Q9UNX9 436 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MFHAS1Q9Y4C4 1052 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 OR1A2Q9Y585 309 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ETV7Q9Y603 341 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MSH6P52701 1360 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NWD2Q9ULI1 1742 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ADGRB1O14514 1584 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FAM135AQ9P2D6 1515 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TRBV2A0A0J9YWF9 115 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 A0A1W2PRB8 838 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF732B4DXR9 585 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MCF2LO15068 1137 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LRCH4O75427 683 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SPAG6O75602 509 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RFPL2O75678 378 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 LINC00271P0C7V0 271 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GNSP15586 552 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF12P17014 697 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SP100P23497 879 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CSTF2P33240 577 aaKnown RBP eCLIP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ADRA1AP35348 466 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TNFRSF4P43489 277 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SLC1A6P48664 564 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 VAMP7P51809 220 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 IL10RBQ08334 325 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 MRPL28Q13084 256 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 BTG3Q14201 252 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 STXBP2Q15833 593 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ADPRMQ3LIE5 342 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DCAF6Q58WW2 860 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 FSCBQ5H9T9 825 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 RABGAP1LQ5R372 815 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF626Q68DY1 528 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PMF1Q6P1K2 205 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PSRC1Q6PGN9 363 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 UQCC3Q6UW78 93 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 PLEKHM3Q6ZWE6 761 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CPEB2Q7Z5Q1 589 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM163Q8TC26 289 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 OTULINQ96BN8 352 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 BPIFA2Q96DR5 249 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TESK2Q96S53 571 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 CDK5RAP1Q96SZ6 601 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 SECISBP2Q96T21 854 aaKnown RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 POLR3CQ9BUI4 534 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-202ENST00000354071 NLNQ9BYT8 704 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 GSN-AS1Q9NRJ2 163 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 TRIM10Q9UDY6 481 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 DNAH6Q9C0G6 4158 aa1.5□□□□□ -2.17
BRCA1-202ENST00000354071 ADAMTS12P58397 1594 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF292O60281 2723 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 EVPLQ92817 2033 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 WDR33Q9C0J8 1336 aaKnown RBP1.49□□□□□ -2.17
BRCA1-202ENST00000354071 NPATQ14207 1427 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 NRAPQ86VF7 1730 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 A0A0G2JPF8 293 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 TRBV4-1A0A0J9YWV2 114 aa1.49□□□□□ -2.17
BRCA1-202ENST00000354071 CTAGE9A4FU28 777 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms