RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ALKAL1Q6UXT8 129 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 FAM124AQ86V42 546 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LAPTM4BQ86VI4 370 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 GPR152Q8TDT2 470 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ST8SIA2Q92186 375 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 DOHHQ9BU89 302 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TRAF4Q9BUZ4 470 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PPA2Q9H2U2 334 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 RETREG1Q9H6L5 497 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 BEX1Q9HBH7 125 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 MCCC2Q9HCC0 563 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TXNL4BQ9NX01 149 aaKnown RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ELOVL2Q9NXB9 296 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 GSTK1Q9Y2Q3 226 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 MEIS3P2A8K0S8 358 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 HHLA1C9JL84 531 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 FAM227AF5H4B4 570 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TLR4O00206 839 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LRRTM2O43300 516 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TRIM3O75382 744 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 GADD45GO95257 159 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 DHFRP00374 187 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PRPS2P11908 318 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SRCP12931 536 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ACPPP15309 386 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 RHOQP17081 205 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SDC1P18827 310 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LHCGRP22888 699 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 MAPK1P28482 360 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 DCDC1P59894 354 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TTLL9Q3SXZ7 439 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LEXMQ3ZCV2 418 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 IFI44LQ53G44 452 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ATAT1Q5SQI0 421 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 BHLHA9Q7RTU4 235 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TMEM145Q8NBT3 493 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LHFPL5Q8TAF8 219 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.33□□□□□ -1.248e-23■■■■■ 41.9
BRCA1-201ENST00000352993 TBC1D20Q96BZ9 403 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 AP2M1Q96CW1 435 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 APIPQ96GX9 242 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 FERD3LQ96RJ6 166 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SMAD5Q99717 465 aaKnown RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 MND1Q9BWT6 205 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 CDCA4Q9BXL8 241 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 GPR63Q9BZJ6 419 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SPNS1Q9H2V7 528 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ARL15Q9NXU5 204 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ATPIF1Q9UII2 106 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SCML1Q9UN30 329 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PPIEQ9UNP9 301 aaKnown RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 IQCMA0A1B0GVH7 501 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PROM1O43490 865 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 STK16O75716 305 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 NCR1O76036 304 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SLC25A14O95258 325 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TBX18O95935 607 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 CRYBB2P43320 205 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 KCNJ10P78508 379 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 ARHGAP1Q07960 439 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 DOC2BQ14184 412 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 MICAQ29983 383 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 RASSF6Q6ZTQ3 369 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PRSS42Q7Z5A4 293 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 PTOV1Q86YD1 416 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SPATA2LQ8IUW3 424 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-201ENST00000352993 TCEANCQ8N8B7 351 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 C11orf65Q8NCR3 313 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 MDGA1Q8NFP4 955 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 OR52P1PQ8NH57 321 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 KCNJ9Q92806 393 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LPPQ93052 612 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 FBXW5Q969U6 566 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SLC25A46Q96AG3 418 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 SERPINB11Q96P15 392 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 CD244Q9BZW8 370 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 KCNN2Q9H2S1 579 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 NDUFAF4Q9P032 175 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 FAM8A1Q9UBU6 413 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 CCL27Q9Y4X3 112 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 UTRNP46939 3433 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 A0A0G2JMZ2 1700 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LRRC37A2A6NM11 1700 aa7.33□□□□□ -1.24
BRCA1-201ENST00000352993 LOC105369274A0A096LPK9 316 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 A0A1B0GVC2 190 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 HYKKA2RU49 373 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 LINC00862A6NCI5 91 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 A6NIN4 97 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 TEX46H3BTG2 121 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 KPNA5O15131 536 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 TAPBPO15533 448 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 HCN1O60741 890 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 RAF1P04049 648 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 HRGP04196 525 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 ACADMP11310 421 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 DARSP14868 501 aaKnown RBP7.32□□□□□ -1.24
BRCA1-201ENST00000352993 DPEP1P16444 411 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 SDHBP21912 280 aa7.32□□□□□ -1.24
BRCA1-201ENST00000352993 KELP23276 732 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms