RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 KDELR2P33947 212 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 DCTP40126 519 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 MAPK12P53778 367 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ERVK-21P61565 698 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ABHD18Q0P651 414 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 RPS26P11Q5JNZ5 115 aaPredicted RBP13.31□□□□□ -0.28
TRIM4-201ENST00000349062 IGFN1Q86VF2 1251 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 RIMKLAQ8IXN7 391 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 TMIEQ8NEW7 156 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 DMRT3Q9NQL9 472 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 TRPC4Q9UBN4 977 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 PCDHGA8Q9Y5G5 932 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ISM1B1AKI9 464 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 M0QX08 132 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 DNTTP04053 509 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 IDSP22304 550 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 MYF6P23409 242 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 GPC1P35052 558 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 RNF144AP50876 292 aaPredicted RBP13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ALDH3A2P51648 485 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ARHGDIAP52565 204 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 FGL2Q14314 439 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ITPRIPL2Q3MIP1 535 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 ZNF761Q86XN6 746 aaPredicted RBP13.31□□□□□ -0.28
TRIM4-201ENST00000349062 OR4E2Q8NGC2 313 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 OR2L2Q8NH16 312 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 OR10G6Q8NH81 332 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 CCL4L1Q8NHW4 92 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 RAD21L1Q9H4I0 556 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
TRIM4-201ENST00000349062 POM121BA6NF01 834 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 UPK1AO00322 258 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 KLF8O95600 359 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 MANFP55145 182 aaKnown RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 ZNF763Q0D2J5 394 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 MOGQ16653 247 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 ZNF750Q32MQ0 723 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 NRSN1Q8IZ57 195 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 C8orf59Q8N0T1 100 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 DEFB119Q8N690 84 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 VANGL1Q8TAA9 524 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 C16orf78Q8WTQ4 265 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 COL26A1Q96A83 441 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 RHNO1Q9BSD3 238 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 EQTNQ9NQ60 294 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 DOCK8Q8NF50 2099 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 J3KTA2 159 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 EIF3FO00303 357 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 HOXB2P14652 356 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 FCARP24071 287 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 IGFBP5P24593 272 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 OPRL1P41146 370 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 CSTF3Q12996 717 aaKnown RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 SMN1Q16637 294 aaKnown RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 ATG9BQ674R7 924 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 ENPP7Q6UWV6 458 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 NANOGNBQ7Z5D8 188 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 SPRED1Q7Z699 444 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 TANKQ92844 425 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 INSM2Q96T92 566 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 AMBRA1Q9C0C7 1298 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 LHPPQ9H008 270 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 MUC13Q9H3R2 512 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 SPATA6Q9NWH7 488 aaPredicted RBP13.3□□□□□ -0.28
TRIM4-201ENST00000349062 TMED5Q9Y3A6 229 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 HEATR5BQ9P2D3 2071 aa13.3□□□□□ -0.28
TRIM4-201ENST00000349062 A0A1W2PRB8 838 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 PI15O43692 258 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 LILRB5O75023 590 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 PRSS23O95084 383 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 ALPLP05186 524 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 IDH2P48735 452 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 NKX2-5P52952 324 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 MLLT10P55197 1068 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 SLC5A12Q1EHB4 618 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 PRSS53Q2L4Q9 553 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 GGTA1PQ4G0N0 100 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 AGBL4Q5VU57 503 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 SDE2Q6IQ49 451 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 PLPP6Q8IY26 295 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 UTP15Q8TED0 518 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 SLC6A16Q9GZN6 736 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 KLHL42Q9P2K6 505 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 THAP10Q9P2Z0 257 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 NDRG2Q9UN36 371 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 H0YIV9 168 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 SUV39H1O43463 412 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 NARSO43776 548 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 PAPLNO95428 1278 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 EIF2S1P05198 315 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 PTPN6P29350 595 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 SKIV2LQ15477 1246 aaKnown RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
TRIM4-201ENST00000349062 WDR53Q7Z5U6 358 aaPredicted RBP13.29□□□□□ -0.28
TRIM4-201ENST00000349062 GPR149Q86SP6 731 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms