RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
TPM4-202ENST00000344824 PCSK5Q92824 1860 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 NDUFAB1O14561 156 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 P2RX6O15547 441 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 FAM107AO95990 144 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 JUNP05412 331 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 ENO1P06733 434 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 C1GALT1C1LP0DN25 315 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 UROSP10746 265 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 PIM1P11309 404 aaPredicted RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 PCNAP12004 261 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 GRK3P35626 688 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 AQP5P55064 265 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 ATP1A4Q13733 1029 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 ZRSR2Q15696 482 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 YOD1Q5VVQ6 348 aaPredicted RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 FBXO42Q6P3S6 717 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 MAVSQ7Z434 540 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 PTRH1Q86Y79 214 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 ZNF473Q8WTR7 871 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 TWIST2Q8WVJ9 160 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 ABHD17AQ96GS6 310 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 C10orf90Q96M02 699 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 ZNF285Q96NJ3 590 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 HBEGFQ99075 208 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 SPNS1Q9H2V7 528 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 SYNPO2LQ9H987 977 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 GEMIN8Q9NWZ8 242 aaKnown RBP13.1□□□□□ -0.31
TPM4-202ENST00000344824 CTSFQ9UBX1 484 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
TPM4-202ENST00000344824 KCNE1BA0A087WTH5 132 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 PIP5K1BO14986 540 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 HDAC3O15379 428 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 DIAPH2O60879 1101 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 CNOT3O75175 753 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 MED26O95402 600 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 CHEK2O96017 543 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 SFTPCP11686 197 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 GCGRP47871 477 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 CCR8P51685 355 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 RPS15AP62244 130 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 BTKQ06187 659 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 DDX39BQ13838 428 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 RBBP5Q15291 538 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 LIPJQ5W064 366 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 ATG9BQ674R7 924 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 GRHL2Q6ISB3 625 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 OR2Y1Q8NGV0 311 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 ZCCHC10Q8TBK6 192 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 THAP4Q8WY91 577 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 CCT6BQ92526 530 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 PTCD3Q96EY7 689 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 FAR2Q96K12 515 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 OR2A5Q96R48 311 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 TMEM120AQ9BXJ8 343 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 SLC29A3Q9BZD2 475 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 PELI2Q9HAT8 420 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 ZNF304Q9HCX3 659 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 SLC22A11Q9NSA0 550 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 TMEM184CQ9NVA4 438 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 KLHL14Q9P2G3 628 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 VTI1BQ9UEU0 232 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 TP53TG5Q9Y2B4 290 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 DNAJC15Q9Y5T4 150 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 GCN1Q92616 2671 aaKnown RBP13.09□□□□□ -0.31
TPM4-202ENST00000344824 DOCK10Q96BY6 2186 aa13.09□□□□□ -0.31
TPM4-202ENST00000344824 GOLGA8QA0A0J9YX86 632 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 FITM1A5D6W6 292 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 GOLGA8OA6NCC3 632 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 GOLGA8NF8WBI6 632 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 MANBAO00462 879 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 SNX3O60493 162 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 UGDHO60701 494 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 WFS1O76024 890 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 TGDSO95455 350 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 SERPIND1P05546 499 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 FGF4P08620 206 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 LINC00032P0C843 101 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 ITGAXP20702 1163 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 HRH2P25021 359 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 HNF4AP41235 474 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 CCL11P51671 97 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 ARFIP2P53365 341 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 CSNK1G2P78368 415 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 IFT88Q13099 833 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 HIST2H2ACQ16777 129 aaPredicted RBP13.08□□□□□ -0.32
TPM4-202ENST00000344824 UGT3A2Q3SY77 523 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 GGTA1PQ4G0N0 100 aa13.08□□□□□ -0.32
TPM4-202ENST00000344824 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms