RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HPSEQ9Y251 543 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ERVK-7P63135 1459 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 A0A1W2PPW3 197 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMEM72A0PK05 275 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NUDT19A8MXV4 375 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 USP17L10C9JJH3 530 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM86B1E9PN63 330 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TLR5O60602 858 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 KLRC3Q07444 240 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NFATC4Q14934 902 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TRIM61Q5EBN2 209 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 LILRB2Q8N423 598 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMBIM1Q969X1 311 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NTAN1Q96AB6 310 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 C14orf79Q96F83 325 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZBED6CLQ96FA7 236 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 IL4I1Q96RQ9 567 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OCSTAMPQ9BR26 566 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMPRSS5Q9H3S3 457 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 A0A1B0GV50 99 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 F10P00742 488 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CSTBP04080 98 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 AMY2BP19961 511 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MMP12P39900 470 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZNF143P52747 638 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 SEMA5AQ13591 1074 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 INAVAQ3KP66 663 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CDCA2Q69YH5 1023 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM185AQ8N0U4 392 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR13C2Q8NGS9 318 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 DCUN1D4Q92564 292 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 BEX1Q9HBH7 125 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 WASHC1A8K0Z3 465 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TPST2O60704 377 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CSDE1O75534 798 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 HTR3BO95264 441 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 CPN1P15169 458 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 PPP3CBP16298 524 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 IL7RP16871 459 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 GPR85P60893 370 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SRSF11Q05519 484 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 ATP6AP1Q15904 470 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MINDY4Q4G0A6 757 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZC3H14Q6PJT7 736 aaKnown RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 WASH2PQ6VEQ5 465 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM131BQ86XD5 332 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ARL6IP6Q8N6S5 226 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZNF781Q8N8C0 355 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 TMEM104Q8NE00 496 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ST7LQ8TDW4 575 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 MMP19Q99542 508 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 APMAPQ9HDC9 416 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 DCP1AQ9NPI6 582 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 A0A0A6YYH2 397 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 A6NJ64 397 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 E7ESA3 106 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 P2RX6O15547 441 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 HOXA2O43364 376 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 KIAA0513O60268 411 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR2C1O95371 312 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 IL6STP40189 918 aaPredicted RBP5.98□□□□□ -1.45
VCAN-203ENST00000343200 CLCN7P51798 805 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NFKB2Q00653 900 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 GINS1Q14691 196 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 NTRK2Q16620 822 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 C21orf62-AS1Q17RA5 79 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 UGT3A2Q3SY77 523 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 IGSF11Q5DX21 431 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 FAM69AQ5T7M9 428 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SLC26A9Q7LBE3 791 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 SLAMF9Q96A28 289 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 ZNF559Q9BR84 538 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 OR51V1Q9H2C8 321 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 DUSP22Q9NRW4 184 aa5.98□□□□□ -1.45
VCAN-203ENST00000343200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.98□□□□□ -1.452e-7■■■■■ 28.3
VCAN-203ENST00000343200 CLIC1O00299 241 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CAPN15O75808 1086 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RBBP9O75884 186 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RPLP2P05387 115 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 REEP3Q6NUK4 255 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ADIPOR2Q86V24 386 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ANKRD46Q86W74 232 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MARCH9Q86YJ5 346 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SUN3Q8TAQ9 357 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SPATA20Q8TB22 786 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SLC35F5Q8WV83 523 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MRI1Q9BV20 369 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PIGMQ9H3S5 423 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CNTNAP5Q8WYK1 1306 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MEIOCA2RUB1 952 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CYP27B1O15528 508 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 HTR1AP08908 422 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PRKACGP22612 351 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RFC3P40938 356 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PTPN9P43378 593 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TUBP50607 506 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 LAPTM5Q13571 262 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ARMC12Q5T9G4 340 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TMEM236Q5W0B7 351 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ACOT1Q86TX2 421 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms