RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MS4A8Q9BY19 250 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 IQCGQ9H095 443 aaKnown RBP18.11■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF160Q9HCG1 818 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 MRPS33Q9Y291 106 aaKnown RBP18.11■□□□□ 0.49
SYNE4-202ENST00000340477 SPACA6W5XKT8 324 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 PCSK5Q92824 1860 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 A0A0G2JN53 185 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 H0YIV9 168 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 CDC123O75794 336 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 COX6A1P12074 109 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 HERVK_113P63132 956 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 RAPSNQ13702 412 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 CPSF6Q16630 551 aaKnown RBP eCLIP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 CCDC153Q494R4 210 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 C10orf62Q5T681 223 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 ADNP2Q6IQ32 1131 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 TMEM205Q6UW68 189 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 PRICKLE2Q7Z3G6 844 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 VN1R5Q7Z5H4 357 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF605Q86T29 641 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 PTRH1Q86Y79 214 aaKnown RBP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 KBTBD2Q8IY47 623 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 L3MBTL4Q8NA19 623 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 CCDC63Q8NA47 563 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 TEX19Q8NA77 164 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 HUS1BQ8NHY5 278 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 F2RL3Q96RI0 385 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 TBCDQ9BTW9 1192 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 TUBB6Q9BUF5 446 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 ERVK-6Q9BXR3 956 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 ROPN1BQ9BZX4 212 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 LHPPQ9H008 270 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 ROPN1Q9HAT0 212 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 SEMA4BQ9NPR2 832 aaPredicted RBP18.1■□□□□ 0.49
SYNE4-202ENST00000340477 MID2Q9UJV3 735 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 GRID1Q9ULK0 1009 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 STK38LQ9Y2H1 464 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 TSC22D4Q9Y3Q8 395 aa18.1■□□□□ 0.49
SYNE4-202ENST00000340477 LOC102723996A0A087X1L8 192 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 IGHV1-45A0A0A0MS14 117 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 A0A1W2PPM1 405 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 A0A1W2PQ72 361 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 MAGEB17A8MXT2 336 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 DPM1O60762 260 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 B4GALT2O60909 372 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 MYL2P10916 166 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 ICAM2P13598 275 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 DEKP35659 375 aaKnown RBP18.09■□□□□ 0.49
SYNE4-202ENST00000340477 SSR2P43308 183 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 SOX8P57073 446 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 KLRB1Q12918 225 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 IFT88Q13099 833 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 ABRAXAS2Q15018 415 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 NSDHLQ15738 373 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 AP5B1Q2VPB7 878 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 KHDRBS2Q5VWX1 349 aaKnown RBP18.09■□□□□ 0.49
SYNE4-202ENST00000340477 ABHD17CQ6PCB6 329 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 CPEB2Q7Z5Q1 589 aaKnown RBP18.09■□□□□ 0.49
SYNE4-202ENST00000340477 MILR1Q7Z6M3 343 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 PARP9Q8IXQ6 854 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 CA13Q8N1Q1 262 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 MREGQ8N565 214 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 OR2W6PQ8NHA6 318 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF483Q8TF39 744 aaPredicted RBP18.09■□□□□ 0.49
SYNE4-202ENST00000340477 NTMT1Q9BV86 223 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 NUDT9Q9BW91 350 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 C1QTNF3Q9BXJ4 246 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF700Q9H0M5 742 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 DMRT3Q9NQL9 472 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 C5AR2Q9P296 337 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 ANAPC2Q9UJX6 822 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 RNF11Q9Y3C5 154 aa18.09■□□□□ 0.49
SYNE4-202ENST00000340477 TNRC6AQ8NDV7 1962 aaKnown RBP18.08■□□□□ 0.49
SYNE4-202ENST00000340477 C4orf51C9J302 202 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 OR7A17O14581 309 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 PRMT3O60678 531 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 SUPT7LO94864 414 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 TGFB1P01137 390 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 KRT4P19013 534 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 NR1D1P20393 614 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 PTX3P26022 381 aaPredicted RBP18.08■□□□□ 0.48
SYNE4-202ENST00000340477 CERS1P27544 350 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 CRHR1P34998 444 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 RAB38P57729 211 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 ACTN3Q08043 901 aaPredicted RBP18.08■□□□□ 0.48
SYNE4-202ENST00000340477 ZRSR2Q15696 482 aaKnown RBP18.08■□□□□ 0.48
SYNE4-202ENST00000340477 GGTA1PQ4G0N0 100 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 AGAP7PQ5VUJ5 663 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 QSOX2Q6ZRP7 698 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 OR52B6Q8NGF0 335 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 RGMAQ96B86 450 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 THOC3Q96J01 351 aaKnown RBP18.08■□□□□ 0.48
SYNE4-202ENST00000340477 NSUN5Q96P11 429 aaKnown RBP18.08■□□□□ 0.48
SYNE4-202ENST00000340477 AGAP4Q96P64 663 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 MTERF1Q99551 399 aaKnown RBP18.08■□□□□ 0.48
SYNE4-202ENST00000340477 AICDAQ9GZX7 198 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 ELOVL6Q9H5J4 265 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 MLXIPLQ9NP71 852 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 LANCL2Q9NS86 450 aa18.08■□□□□ 0.48
SYNE4-202ENST00000340477 SCN2AQ99250 2005 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms