RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 XCR1P46094 333 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 DCDP81605 110 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 HSF2Q03933 536 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ESX1Q8N693 406 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 KAT2AQ92830 837 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 RNFT2Q96EX2 444 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 MKRN2Q9H000 416 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 ICAM2P13598 275 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 GABRG2P18507 467 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 CARTPTQ16568 116 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 C19orf47Q8N9M1 422 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 SMIM14Q96QK8 99 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 TPRKBQ9Y3C4 175 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 WDR45Q9Y484 360 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 GMPPBQ9Y5P6 360 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 TNFRSF10CO14798 259 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 CLOCKO15516 846 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 RFPL3O75679 317 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 HOXB6P17509 224 aaKnown RBP12.3□□□□□ -0.44
LIN54-201ENST00000340417 SCTRP47872 440 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 DNAJC5GQ8N7S2 189 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 RTKNQ9BST9 563 aa12.3□□□□□ -0.44
LIN54-201ENST00000340417 RTCAO00442 366 aaKnown RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 MFN2O95140 757 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 TNFSF15O95150 251 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 FDXRP22570 491 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ABRAXAS2Q15018 415 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 IFI44LQ53G44 452 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ZNF678Q5SXM1 525 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 OR52J3Q8NH60 311 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 DNAJC9Q8WXX5 260 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 MYO5AQ9Y4I1 1855 aaKnown RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 DHRS12A0PJE2 317 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 PDYNP01213 254 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 LIPEQ05469 1076 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 KLHL26Q53HC5 615 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 LSMEM2Q8N112 164 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 DHRSXQ8N5I4 330 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 OR4C6Q8NH72 309 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 FBXL8Q96CD0 374 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ALOXE3Q9BYJ1 711 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 AKTIPQ9H8T0 292 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 PAPOLBQ9NRJ5 636 aaKnown RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ASNA1O43681 348 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 RSL1D1O76021 490 aaKnown RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ATG14Q6ZNE5 492 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 RPS27LQ71UM5 84 aaKnown RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 MBNL1Q9NR56 388 aaKnown RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 SMCHD1A6NHR9 2005 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 NPIPA2E9PIF3 369 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 NPIPA3F8WFD2 350 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ENGP17813 658 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 POLE2P56282 527 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 CD47Q08722 323 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 TLR1Q15399 786 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 LCTLQ6UWM7 567 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 C6orf15Q6UXA7 325 aaPredicted RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 ADIPOR2Q86V24 386 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ATCAYQ86WG3 371 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 NUP43Q8NFH3 380 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 PIH1D2Q8WWB5 315 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 TIMMDC1Q9NPL8 285 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 FGF21Q9NSA1 209 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 WWP2O00308 870 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 SNX3O60493 162 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 NME6O75414 186 aaPredicted RBP12.29□□□□□ -0.44
LIN54-201ENST00000340417 HSD3B1P14060 373 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 HSD3B2P26439 372 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 METTL21CQ5VZV1 264 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 TMEM135Q86UB9 458 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 ZADH2Q8N4Q0 377 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 HUS1BQ8NHY5 278 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.29□□□□□ -0.442e-8■■■■■ 39.1
LIN54-201ENST00000340417 ARRDC2Q8TBH0 407 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 KCNA7Q96RP8 456 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 U3KQV3 271 aa12.29□□□□□ -0.44
LIN54-201ENST00000340417 COL4A1P02462 1669 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 TCHHQ07283 1943 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 RGS5O15539 181 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 PSMB9P28065 219 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 PDHA2P29803 388 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 ZNF140P52738 457 aaPredicted RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 PDCD4Q53EL6 469 aaKnown RBP12.28□□□□□ -0.44
LIN54-201ENST00000340417 C16orf87Q6PH81 154 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 NEK10Q6ZWH5 1172 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 GPAT4Q86UL3 456 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 SVOPQ8N4V2 548 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 RHEBL1Q8TAI7 183 aa12.28□□□□□ -0.44
LIN54-201ENST00000340417 LPGAT1Q92604 370 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms