RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 GPRIN3Q6ZVF9 776 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 LAPTM4BQ86VI4 370 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 OR2Y1Q8NGV0 311 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 STT3BQ8TCJ2 826 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 GAL3ST3Q96A11 431 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 SMIM10Q96HG1 83 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 ATP6V1G3Q96LB4 118 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 ZNF382Q96SR6 550 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 RBCK1Q9BYM8 510 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 OR51B5Q9H339 312 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 FARSBQ9NSD9 589 aaKnown RBP13.45□□□□□ -0.26
CTSL-201ENST00000340342 TUBD1Q9UJT1 453 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 MID2Q9UJV3 735 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 KCNMB2Q9Y691 235 aa13.45□□□□□ -0.26
CTSL-201ENST00000340342 COL6A6A6NMZ7 2263 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 IGLV3-12A0A075B6K2 115 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 URADA6NGE7 173 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 MAGEB17A8MXT2 336 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 HMGB1P1B2RPK0 211 aaPredicted RBP13.44□□□□□ -0.26
CTSL-201ENST00000340342 H3BQF6 201 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 PRPF4O43172 522 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTSL-201ENST00000340342 FAM87AP0C7U9 286 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 OTX2P32243 289 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 PIK3CBP42338 1070 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 ETV4P43268 484 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 POLE2P56282 527 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 BTN3A2P78410 334 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 OCA2Q04671 838 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 KLC1Q07866 573 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 C19orf57Q0VDD7 668 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 GGTA1PQ4G0N0 100 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 SGO1Q5FBB7 561 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 CFAP157Q5JU67 520 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 TTC19Q6DKK2 380 aaPredicted RBP13.44□□□□□ -0.26
CTSL-201ENST00000340342 UBE3DQ7Z6J8 389 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 ZC3H7AQ8IWR0 971 aaKnown RBP13.44□□□□□ -0.26
CTSL-201ENST00000340342 CDYL2Q8N8U2 506 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 OR2L5Q8NG80 312 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 OR51Q1Q8NH59 317 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 ADAMTS17Q8TE56 1095 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 AGAP11Q8TF27 550 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 REPS1Q96D71 796 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 KCNA7Q96RP8 456 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 HBEGFQ99075 208 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 MESP1Q9BRJ9 268 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 GATA5Q9BWX5 397 aaPredicted RBP13.44□□□□□ -0.26
CTSL-201ENST00000340342 SHCBP1LQ9BZQ2 653 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 WDR54Q9H977 334 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 SSU72Q9NP77 194 aaKnown RBP13.44□□□□□ -0.26
CTSL-201ENST00000340342 KCNK9Q9NPC2 374 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
CTSL-201ENST00000340342 ACTL7BQ9Y614 415 aa13.44□□□□□ -0.26
CTSL-201ENST00000340342 OR2W5A6NFC9 320 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 RTCAO00442 366 aaKnown RBP13.43□□□□□ -0.26
CTSL-201ENST00000340342 TRIM13O60858 407 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 BMP10O95393 424 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 ETHE1O95571 254 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 MLYCDO95822 493 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 SERPINB1P30740 379 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 XCR1P46094 333 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 EFNA3P52797 238 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 MAGOHP61326 146 aaKnown RBP13.43□□□□□ -0.26
CTSL-201ENST00000340342 SSPNQ14714 243 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 KHDRBS2Q5VWX1 349 aaKnown RBP13.43□□□□□ -0.26
CTSL-201ENST00000340342 TRIM40Q6P9F5 258 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 ABHD17CQ6PCB6 329 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 ZCCHC23Q6ZST2 131 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 APLFQ8IW19 511 aaPredicted RBP13.43□□□□□ -0.26
CTSL-201ENST00000340342 TLCD1Q96CP7 247 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 CMTM7Q96FZ5 175 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 PEX11GQ96HA9 241 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 FAR2Q96K12 515 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 QRFPRQ96P65 431 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 SORBS1Q9BX66 1292 aaKnown RBP13.43□□□□□ -0.26
CTSL-201ENST00000340342 MLXIPLQ9NP71 852 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 TNFRSF12AQ9NP84 129 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 MID1IP1Q9NPA3 183 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 TRPS1Q9UHF7 1281 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 TSC22D4Q9Y3Q8 395 aa13.43□□□□□ -0.26
CTSL-201ENST00000340342 SPENQ96T58 3664 aaKnown RBP13.43□□□□□ -0.26
CTSL-201ENST00000340342 DOCK10Q96BY6 2186 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 CHST10O43529 356 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 CDC123O75794 336 aaPredicted RBP13.42□□□□□ -0.26
CTSL-201ENST00000340342 PDYNP01213 254 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 PRB1P04280 392 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 BPGMP07738 259 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 CERS1P27544 350 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 FOXA1P55317 472 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 PHEXP78562 749 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 IFT88Q13099 833 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 ZNF793Q6ZN11 406 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 CHSY3Q70JA7 882 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 NACC2Q96BF6 587 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 IP6K3Q96PC2 410 aa13.42□□□□□ -0.26
CTSL-201ENST00000340342 CRB3Q9BUF7 120 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms