RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 FAM227AF5H4B4 570 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-203ENST00000340192 RIPK2O43353 540 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PRMT3O60678 531 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 UQCRHP07919 91 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 ABHD2P08910 425 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 HPDP32754 393 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PLA2G16P53816 162 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 AP2B1P63010 937 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 BTG2P78543 158 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PCDH1Q08174 1060 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 NAA30Q147X3 362 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-203ENST00000340192 BTBD16Q32M84 506 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 TECRLQ5HYJ1 363 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PLAG1Q6DJT9 500 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 TEX9Q8N6V9 391 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 OR2L5Q8NG80 312 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 SNRNP40Q96DI7 357 aaKnown RBP13.74□□□□□ -0.21
ERCC1-203ENST00000340192 CNDP1Q96KN2 507 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PTCHD1Q96NR3 888 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 CPSF2Q9P2I0 782 aaKnown RBP13.74□□□□□ -0.21
ERCC1-203ENST00000340192 ANGPTL3Q9Y5C1 460 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 PCDHGA10Q9Y5H3 936 aa13.74□□□□□ -0.21
ERCC1-203ENST00000340192 ASH1LQ9NR48 2969 aaKnown RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 A0A088AWK7 358 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 VPS4BO75351 444 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 PCNAP12004 261 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 MAOAP21397 527 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 ZNF10P21506 573 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 GCAP28676 217 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 OR4D2P58180 307 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 RUNX2Q13950 521 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 PCBP2Q15366 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 B3GNTL1Q67FW5 361 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 MED27Q6P2C8 311 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 TRIM40Q6P9F5 258 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 ABHD17CQ6PCB6 329 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 PAPD4Q6PIY7 484 aaKnown RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 QSOX2Q6ZRP7 698 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 GSPT2Q8IYD1 628 aaKnown RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 LAS2Q8IYD9 372 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 GALNT11Q8NCW6 608 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 UBE2E3Q969T4 207 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 C19orf60Q96EN9 201 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 F2RL3Q96RI0 385 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 NPLQ9BXD5 320 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-203ENST00000340192 PRM3Q9NNZ6 103 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 PRDM9Q9NQV7 894 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 VPS4AQ9UN37 437 aa13.73□□□□□ -0.21
ERCC1-203ENST00000340192 B3GALT2O43825 422 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 SIX3O95343 332 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 SNRPAP09012 282 aaKnown RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 RBP1P09455 135 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 COL6A2P12110 1019 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 UQCRFS1P47985 274 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 ARG2P78540 354 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 ZNF169Q14929 603 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 TLR1Q15399 786 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 EXT1Q16394 746 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 TSNAXIP1Q2TAA8 658 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 GRHL2Q6ISB3 625 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 GOLGA7Q7Z5G4 137 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 MYLK4Q86YV6 388 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 CATSPER1Q8NEC5 780 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 OR7G3Q8NG95 312 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 M1APQ8TC57 530 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 ZNF473Q8WTR7 871 aaKnown RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 SCYL1Q96KG9 808 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 MAGEB10Q96LZ2 347 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 SERINC2Q96SA4 455 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 LPAR4Q99677 370 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 MS4A8Q9BY19 250 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 TXLNGYQ9BZA5 131 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 L2HGDHQ9H9P8 463 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 COPS7BQ9H9Q2 264 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 PLA2G3Q9NZ20 509 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 XPR1Q9UBH6 696 aa13.72□□□□□ -0.21
ERCC1-203ENST00000340192 TNPO3Q9Y5L0 923 aaKnown RBP13.72□□□□□ -0.21
ERCC1-203ENST00000340192 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 DYTNA2CJ06 578 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 A8MUI8 341 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 E2F3O00716 465 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 SH3BGRLO75368 114 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 F10P00742 488 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 GNLYP22749 145 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 CERS1P27544 350 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 EEF1DP29692 281 aaKnown RBP13.71□□□□□ -0.21
ERCC1-203ENST00000340192 SERPINB1P30740 379 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 MTTPP55157 894 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 RAB38P57729 211 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 SLC26A5P58743 744 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 ZNF33BQ06732 778 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 TGM3Q08188 693 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 GTF2H2Q13888 395 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 LGSNQ5TDP6 509 aa13.71□□□□□ -0.21
ERCC1-203ENST00000340192 ABHD17BQ5VST6 288 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms