RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RIOK2Q9BVS4 552 aaKnown RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 SPTBN5Q9NRC6 3674 aaKnown RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 UPK3BL1B0FP48 263 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 UPK3BL2E5RIL1 263 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 EIF3FO00303 357 aaPredicted RBP18.03■□□□□ 0.48
PSPC1-201ENST00000338910 FKBP9O95302 570 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 ADH5P11766 374 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF30P17039 623 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 GNG2P59768 71 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 SLC14A1Q13336 389 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 FBXO43Q4G163 708 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 USP39Q53GS9 565 aaKnown RBP18.03■□□□□ 0.48
PSPC1-201ENST00000338910 FAM78AQ5JUQ0 283 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 VN1R5Q7Z5H4 357 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 TCAIMQ8N3R3 496 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 SAMD11Q96NU1 681 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 TAS2R9Q9NYW1 312 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 BTBD3Q9Y2F9 522 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 OR2AG2A6NM03 316 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 SLC28A1O00337 649 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 POU2F2P09086 479 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 CISD3P0C7P0 127 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 GALK2Q01415 458 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 ZXDCQ2QGD7 858 aaPredicted RBP18.03■□□□□ 0.48
PSPC1-201ENST00000338910 SNAP47Q5SQN1 464 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 RNF165Q6ZSG1 346 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 TRIM46Q7Z4K8 759 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 RASSF5Q8WWW0 418 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 GGHQ92820 318 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 NEDD4LQ96PU5 975 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 CHCHD6Q9BRQ6 235 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 GABARAPL3Q9BY60 117 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 LRTM1Q9HBL6 345 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 ERVK13-1Q9NX77 482 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 THUMPD1Q9NXG2 353 aaKnown RBP18.03■□□□□ 0.48
PSPC1-201ENST00000338910 TRAPPC4Q9Y296 219 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 PLXNB3Q9ULL4 1909 aa18.03■□□□□ 0.48
PSPC1-201ENST00000338910 CLCA1A8K7I4 914 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 ULK1O75385 1050 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 CDKN2CP42773 168 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 RGS6P49758 472 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF805Q5CZA5 627 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF517Q6ZMY9 492 aaPredicted RBP18.02■□□□□ 0.48
PSPC1-201ENST00000338910 VTCN1Q7Z7D3 282 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 NPAS3Q8IXF0 933 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 CYP4Z2PQ8N1L4 340 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 DMRTB1Q96MA1 342 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 AMBNQ9NP70 447 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 PLSCR3Q9NRY6 295 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
PSPC1-201ENST00000338910 OTOL1A6NHN0 477 aaPredicted RBP18.02■□□□□ 0.47
PSPC1-201ENST00000338910 A8MV72 311 aaPredicted RBP18.02■□□□□ 0.47
PSPC1-201ENST00000338910 FADS2P1A8MWK0 482 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 B3GALT4O96024 378 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 VIPP01282 170 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 ADORA3P0DMS8 318 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 BCKDHAP12694 445 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 GRIN2CQ14957 1233 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 CPSF6Q16630 551 aaKnown RBP eCLIP18.02■□□□□ 0.47
PSPC1-201ENST00000338910 DUSP6Q16828 381 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 ANKRD46Q86W74 232 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 RGL4Q8IZJ4 473 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 PSD4Q8NDX1 1056 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 SETD6Q8TBK2 473 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 ASB11Q8WXH4 323 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 FGF13Q92913 245 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 TMCO6Q96DC7 493 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 AASDHPPTQ9NRN7 309 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 KLHL42Q9P2K6 505 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 ZNF490Q9ULM2 529 aaPredicted RBP18.02■□□□□ 0.47
PSPC1-201ENST00000338910 ITM2BQ9Y287 266 aa18.02■□□□□ 0.47
PSPC1-201ENST00000338910 CTDSP2O14595 271 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 HIST1H2AGP0C0S8 130 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-201ENST00000338910 HIST1H2ADP20671 130 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 ARMCX4Q5H9R4 360 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 Q6ZPB1 254 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-201ENST00000338910 GALNT10Q86SR1 603 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 PGBD3Q8N328 593 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 UBTD2Q8WUN7 234 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 HIST1H2AHQ96KK5 128 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 HIST1H2AJQ99878 128 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 SLC30A2Q9BRI3 323 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 H2AFJQ9BTM1 129 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 NTMT1Q9BV86 223 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 SLC12A9Q9BXP2 914 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 REEP1Q9H902 201 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 PAQR5Q9NXK6 330 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-201ENST00000338910 SPASTQ9UBP0 616 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 CARD8Q9Y2G2 431 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 KLK4Q9Y5K2 254 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 ATG2AQ2TAZ0 1938 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-201ENST00000338910 KPNA3O00505 521 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-201ENST00000338910 ARHGAP33O14559 1287 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 PTHP01270 115 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 EBLN1P0CF75 366 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 SOX6P35712 828 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 SLC6A11P48066 632 aa18.01■□□□□ 0.47
PSPC1-201ENST00000338910 RFX2P48378 723 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms