RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 POU4F1Q01851 419 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 DOC2AQ14183 400 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 C3AR1Q16581 482 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 MAPKAPK3Q16644 382 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 SLC25A25Q6KCM7 469 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 TMIGD1Q6UXZ0 262 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 CCDC25Q86WR0 208 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 SRRM1Q8IYB3 904 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 KLHDC8AQ8IYD2 350 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 SNX31Q8N9S9 440 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 EXT2Q93063 718 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 MS4A6EQ96DS6 147 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 SCMH1Q96GD3 660 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 QRFPRQ96P65 431 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 F2RL3Q96RI0 385 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 DERL2Q9GZP9 239 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 WHRNQ9P202 907 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 LRFN1Q9P244 771 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 RNF14Q9UBS8 474 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 IGKV3D-11A0A0A0MRZ8 115 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 TCRBV16S1A1N1A0A5B0 115 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 FAM159BA6NKW6 160 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 PRKNO60260 465 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 GNAZP19086 355 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 RFC3P40938 356 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 MLF1P58340 268 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 EFTUD2Q15029 972 aaKnown RBP eCLIP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 CDSNQ15517 529 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 UBAP2Q5T6F2 1119 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 ZDHHC24Q6UX98 284 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 CLNKQ7Z7G1 428 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 CMC1Q7Z7K0 106 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 ADAMTSL2Q86TH1 951 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 CTAGE3PQ8IX95 158 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 RNF175Q8N4F7 328 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 PPM1NQ8N819 430 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 MRRFQ96E11 262 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 CCDC120Q96HB5 630 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 RBBP8Q99708 897 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 WWOXQ9NZC7 414 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 CD274Q9NZQ7 290 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 COPG2Q9UBF2 871 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 TINAGQ9UJW2 476 aa12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 ZNF223Q9UK11 482 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 PTBP2Q9UKA9 531 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-201ENST00000338427 PCNX1Q96RV3 2341 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 URADA6NGE7 173 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 SAGE2PA6NJ88 616 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 PRSS44E7EML9 344 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 RTCAO00442 366 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CLGNO14967 610 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CCNT2O60583 730 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 MYO1DO94832 1006 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CD46P15529 392 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 JAK1P23458 1154 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 EEF1DP29692 281 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CASQ1P31415 396 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 GGT5P36269 586 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 MAGEA4P43358 317 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 HNMTP50135 292 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 PER3P56645 1201 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 SLC7A5Q01650 507 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 ALDH6A1Q02252 535 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CALCOCO2Q13137 446 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 INAQ16352 499 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 KBTBD12Q3ZCT8 623 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 XKR6Q5GH73 641 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 UBE3DQ7Z6J8 389 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 MRGPRGQ86SM5 289 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CPSF7Q8N684 471 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 SLC5A8Q8N695 610 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 FAM47BQ8NA70 645 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 BBOF1Q8ND07 529 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 FBXO25Q8TCJ0 367 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 ADAMTS18Q8TE60 1221 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 FBF1Q8TES7 1133 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 DOK4Q8TEW6 326 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 FAR2Q96K12 515 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CSF3RQ99062 836 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 GPR22Q99680 433 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 CPNE1Q99829 537 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 DEFB126Q9BYW3 111 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 ALG9Q9H6U8 611 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 POPDC3Q9HBV1 291 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 PRDM7Q9NQW5 492 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 PRTFDC1Q9NRG1 225 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 DNAJC11Q9NVH1 559 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 NSMCE4AQ9NXX6 385 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 FBXW2Q9UKT8 454 aa12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
NUDCD3-201ENST00000338427 TRBV11-1A0A0K0K1C0 115 aa12.48□□□□□ -0.41
NUDCD3-201ENST00000338427 ANKDD1BA6NHY2 528 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms