RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SPRED1Q7Z699 444 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DHDDSQ86SQ9 333 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ANKRD46Q86W74 232 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZCCHC10Q8TBK6 192 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 UTP15Q8TED0 518 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GTF2H4Q92759 462 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GAL3ST3Q96A11 431 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TCTN2Q96GX1 697 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PRPF18Q99633 342 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 HOPXQ9BPY8 73 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TBCDQ9BTW9 1192 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 STARD5Q9NSY2 213 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ADA2Q9NZK5 511 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SH3BP4Q9P0V3 963 aa14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PRPF19Q9UMS4 504 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZNF318Q5VUA4 2279 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PCDHGA12O60330 932 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RASSF9O75901 435 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KCNH1O95259 989 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FURINP09958 794 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 HIST1H1TP22492 207 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ATP5A1P25705 553 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ARFIP1P53367 373 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ATXN3P54252 364 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 BTN3A2P78410 334 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 COL9A2Q14055 689 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZC3H12BQ5HYM0 836 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C6orf10Q5SRN2 563 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PERM1Q5SV97 790 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PGM2L1Q6PCE3 622 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DLEU7Q6UYE1 221 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 IKBIPQ70UQ0 350 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 HPS6Q86YV9 775 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PLXDC1Q8IUK5 500 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MCATQ8IVS2 390 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MMP21Q8N119 569 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DNAJC22Q8N4W6 341 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RNF148Q8N7C7 305 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ACOT4Q8N9L9 421 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR6C4Q8NGE1 309 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR8J2Q8NGG1 315 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DNAJB14Q8TBM8 379 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CD180Q99467 661 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CCDC3Q9BQI4 270 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GPATCH1Q9BRR8 931 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DUSP26Q9BV47 211 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SPAG4Q9NPE6 437 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SOHLH2Q9NX45 425 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TMEM9Q9P0T7 183 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLC7A8Q9UHI5 535 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ATP6V1HQ9UI12 483 aa14.02□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NUP214P35658 2090 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-201ENST00000338399 EME2A4GXA9 379 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 URADA6NGE7 173 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C9P02748 559 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CTSBP07858 339 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PNLIPP16233 465 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CERS1P27544 350 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CSF2RBP32927 897 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC7A2P52569 658 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NUBP1P53384 320 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MTTPP55157 894 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 WNT3P56703 355 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 KLC1Q07866 573 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLAMF1Q13291 335 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF385BQ569K4 471 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SNAP47Q5SQN1 464 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 R3HCC1LQ7Z5L2 792 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CAMKMTQ7Z624 323 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FBXW8Q8N3Y1 598 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF655Q8N720 491 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CSNK1A1LQ8N752 337 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 COQ8BQ96D53 544 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TRIM8Q9BZR9 551 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RMND5AQ9H871 391 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 COPS7BQ9H9Q2 264 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SERHLQ9NQF3 203 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SCN2BO60939 215 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NPPAP01160 153 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FAM58BPP0C7Q3 252 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SMIM10L1P0DMW3 83 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 EFNA1P20827 205 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RPL3P39023 403 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MLLT3P42568 568 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TSFMP43897 325 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FOXM1Q08050 763 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PDE7AQ13946 482 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CEACAM7Q14002 265 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC9A5Q14940 896 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PIGGQ5H8A4 983 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PLA2G2CQ5R387 149 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DNAJC14Q6Y2X3 702 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 KIAA2013Q8IYS2 634 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZCCHC7Q8N3Z6 543 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PPCDCQ96CD2 204 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SMIM10Q96HG1 83 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ITCHQ96J02 903 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 INPP5KQ9BT40 448 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms