RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GTF2E2P29084 291 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 IL12RB1P42701 662 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 HLCSP50747 726 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 MINDY4Q4G0A6 757 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CYBRD1Q53TN4 286 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 CES4AQ5XG92 561 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 LILRA2Q8N149 483 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 SLC38A3Q99624 504 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 P2RY12Q9H244 342 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 TDRD15B5MCY1 1934 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ATRXP46100 2492 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 PSMA1P25786 263 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 HSF5Q4G112 596 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF784Q8NCA9 323 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 ARRDC3Q96B67 414 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 C12orf43Q96C57 262 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 METTL2AQ96IZ6 378 aaKnown RBP6.05□□□□□ -1.44
PRKDC-202ENST00000338368 GPR34Q9UPC5 381 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 PCDHGA2Q9Y5H1 932 aa6.05□□□□□ -1.44
PRKDC-202ENST00000338368 BTN3A3O00478 584 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 SCAMP2O15127 329 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 HPRP00739 348 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TNFP01375 233 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 DCTP40126 519 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF57Q68EA5 555 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF583Q96ND8 569 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 DPH2Q9BQC3 489 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 INPP5KQ9BT40 448 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ANKHQ9HCJ1 492 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 SVILO95425 2214 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ESPL1Q14674 2120 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 SOBPA7XYQ1 873 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ARHGEF9O43307 516 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 LATO43561 262 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 UGDHO60701 494 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 C6orf141Q5SZD1 244 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 OR52N2Q8NGI0 321 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ANKRD60Q9BZ19 345 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 GORASP2Q9H8Y8 452 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 NEK6Q9HC98 313 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ABCB10Q9NRK6 738 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TRIM43BA6NCK2 446 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RETP07949 1114 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ALPPL2P10696 532 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ELK4P28324 431 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RGNQ15493 299 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ALG11Q2TAA5 492 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MSANTD1Q6ZTZ1 278 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 C6orf120Q7Z4R8 191 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 AMIGO1Q86WK6 493 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 CARM1Q86X55 608 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 C19orf18Q8NEA5 215 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 KAT2AQ92830 837 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 CAMK1GQ96NX5 476 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 GPATCH1Q9BRR8 931 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 EHD1Q9H4M9 534 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 CLMPQ9H6B4 373 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RHCGQ9UBD6 479 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ABCB7O75027 752 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 SAGP10523 405 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ZXDBP98169 803 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 KCNC4Q03721 635 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ST3GAL3Q11203 375 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 IQCCQ4KMZ1 466 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 L3MBTL4Q8NA19 623 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 OR2T11Q8NH01 316 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MAPKAP1Q9BPZ7 522 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 IRAK3Q9Y616 596 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 B4DGG1 531 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 AVPR1BP47901 424 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RAB28P51157 221 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TXNL4AP83876 142 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 BNIP3Q12983 259 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 VEZF1Q14119 521 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 NAGSQ8N159 534 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 CAMKK1Q8N5S9 505 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TSTD1Q8NFU3 115 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 H0YAE9 185 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 NPC1O15118 1278 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 PABPC4LP0CB38 370 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 UQCRC2P22695 453 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 ITGB7P26010 798 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 PRLHRP49683 370 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 IL18R1Q13478 541 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 PRR23CQ6ZRP0 262 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 LMNTD1Q8N9Z9 388 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MFSD2AQ8NA29 543 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 FAM98AQ8NCA5 519 aaKnown RBP6.04□□□□□ -1.44
PRKDC-202ENST00000338368 PIGXQ8TBF5 258 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 GPR151Q8TDV0 419 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 KCNC2Q96PR1 638 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 IL4I1Q96RQ9 567 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 MVB12BQ9H7P6 319 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 HRASLS2Q9NWW9 162 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 GDE1Q9NZC3 331 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 DKK3Q9UBP4 350 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 FAM86C2PA6NEL3 165 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 RHPN2P1A8MT19 583 aa6.04□□□□□ -1.44
PRKDC-202ENST00000338368 TOR1BO14657 336 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms