RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 LARP4Q71RC2 724 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHGA-202ENST00000334654 TIPARPQ7Z3E1 657 aaKnown RBP16.59■□□□□ 0.25
CHGA-202ENST00000334654 COMMD6Q7Z4G1 85 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 C1orf52Q8N6N3 182 aaKnown RBP16.59■□□□□ 0.25
CHGA-202ENST00000334654 SRFBP1Q8NEF9 429 aaKnown RBP16.59■□□□□ 0.25
CHGA-202ENST00000334654 RFWD2Q8NHY2 731 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 MVB12AQ96EY5 273 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 THOC1Q96FV9 657 aaKnown RBP16.59■□□□□ 0.25
CHGA-202ENST00000334654 LRFN5Q96NI6 719 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 KCNC2Q96PR1 638 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 ULBP3Q9BZM4 244 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 WDR55Q9H6Y2 383 aaPredicted RBP16.59■□□□□ 0.25
CHGA-202ENST00000334654 DDX31Q9H8H2 851 aaKnown RBP16.59■□□□□ 0.25
CHGA-202ENST00000334654 NMRK1Q9NWW6 199 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 MSRB2Q9Y3D2 182 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 NEUROG3Q9Y4Z2 214 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 NCOR2Q9Y618 2525 aa16.59■□□□□ 0.25
CHGA-202ENST00000334654 SGK494L7N484 410 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 PEX11AO75192 247 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 HBQ1P09105 142 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 HIST1H1TP22492 207 aaPredicted RBP16.58■□□□□ 0.24
CHGA-202ENST00000334654 TPP2P29144 1249 aaPredicted RBP16.58■□□□□ 0.24
CHGA-202ENST00000334654 EPHA3P29320 983 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 RAP1GDS1P52306 607 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 RUNX2Q13950 521 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 NR6A1Q15406 480 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 SPDYAQ5MJ70 313 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 C6orf136Q5SQH8 315 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 TMEM164Q5U3C3 297 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 C1orf189Q5VU69 101 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 GALNT18Q6P9A2 607 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 ZNF517Q6ZMY9 492 aaPredicted RBP16.58■□□□□ 0.24
CHGA-202ENST00000334654 DSELQ8IZU8 1212 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 METTL27Q8N6F8 245 aaPredicted RBP16.58■□□□□ 0.24
CHGA-202ENST00000334654 ACOT4Q8N9L9 421 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 CLIP3Q96DZ5 547 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 METTL2AQ96IZ6 378 aaKnown RBP16.58■□□□□ 0.24
CHGA-202ENST00000334654 FCRL1Q96LA6 429 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 EBF4Q9BQW3 602 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 AKTIPQ9H8T0 292 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 LRTM1Q9HBL6 345 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 ANKHQ9HCJ1 492 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 C1orf109Q9NX04 203 aa16.58■□□□□ 0.24
CHGA-202ENST00000334654 A0A0A6YYD5 115 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 GMNCA6NCL1 334 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 ZNF860A6NHJ4 632 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 TRPC5OSA6NMA1 111 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 MEN1O00255 615 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 SHOX2O60902 331 aaPredicted RBP16.57■□□□□ 0.24
CHGA-202ENST00000334654 DRD4P21917 467 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 CERS1P27544 350 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 TSFMP43897 325 aaKnown RBP16.57■□□□□ 0.24
CHGA-202ENST00000334654 OR1D4P47884 311 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 IDH3AP50213 366 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 AQP5P55064 265 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 AP5B1Q2VPB7 878 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 MRM1Q6IN84 353 aaKnown RBP16.57■□□□□ 0.24
CHGA-202ENST00000334654 PRMT9Q6P2P2 845 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 COX15Q7KZN9 410 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 ZFAND4Q86XD8 727 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 GALNT6Q8NCL4 622 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 OR5T3Q8NGG3 340 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 PROKR1Q8TCW9 393 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 TUBGCP3Q96CW5 907 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 OR52B2Q96RD2 323 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 CENPKQ9BS16 269 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 PRM3Q9NNZ6 103 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 NPHS2Q9NP85 383 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 PFDN4Q9NQP4 134 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 TXLNGQ9NUQ3 528 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 KCMF1Q9P0J7 381 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 NDOR1Q9UHB4 597 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 ADAM29Q9UKF5 820 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 ACSL6Q9UKU0 697 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 MAU2Q9Y6X3 613 aa16.57■□□□□ 0.24
CHGA-202ENST00000334654 GOLGA8QA0A0J9YX86 632 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 GOLGA8OA6NCC3 632 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 GOLGA8NF8WBI6 632 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 H0YIG0 161 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 TMPRSS11DO60235 418 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 BRINP1O60477 761 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 SEC22BO75396 215 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 RDH16O75452 317 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 GBAP04062 536 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 KLK1P06870 262 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 RBMS1P29558 406 aaKnown RBP16.56■□□□□ 0.24
CHGA-202ENST00000334654 SSR2P43308 183 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 MTTPP55157 894 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 TGM3Q08188 693 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 ACSM2AQ08AH3 577 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 SYT16Q17RD7 645 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 GALNTL6Q49A17 601 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 SPIN4Q56A73 249 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 ACSM2BQ68CK6 577 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 ZCCHC7Q8N3Z6 543 aaKnown RBP16.56■□□□□ 0.24
CHGA-202ENST00000334654 MMABQ96EY8 250 aaPredicted RBP16.56■□□□□ 0.24
CHGA-202ENST00000334654 PPP3R2Q96LZ3 170 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 SERINC2Q96SA4 455 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 SLC7A5P2Q9GIP4 190 aa16.56■□□□□ 0.24
CHGA-202ENST00000334654 RIC8BQ9NVN3 520 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms