RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 A0A1W2PQ09 198 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 IL7P13232 177 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 ITGA2P17301 1181 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 CHMP24386 653 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 FAM26DQ5JW98 314 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 RETSATQ6NUM9 610 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 SLC44A2Q8IWA5 706 aaPredicted RBP22.65■■□□□ 1.22
TSKU-201ENST00000333090 KLF16Q9BXK1 252 aaPredicted RBP22.65■■□□□ 1.22
TSKU-201ENST00000333090 KLHL42Q9P2K6 505 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 ACSL6Q9UKU0 697 aa22.65■■□□□ 1.22
TSKU-201ENST00000333090 SH3D21A4FU49 640 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 TMEM88BA6NKF7 163 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 NOTOA8MTQ0 251 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 ASMTP46597 345 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 MVDP53602 400 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 HBA1P69905 142 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 DGKKQ5KSL6 1271 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 CHTF18Q8WVB6 975 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 MED8Q96G25 268 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 SGK2Q9HBY8 427 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 RNF186Q9NXI6 227 aa22.64■■□□□ 1.22
TSKU-201ENST00000333090 GADD45GO95257 159 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 C21orf58P58505 322 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 SMAD3P84022 425 aaKnown RBP22.64■■□□□ 1.21
TSKU-201ENST00000333090 SNAP47Q5SQN1 464 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 GCNT6Q5T4J0 391 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 CACTIN-AS1Q8N1I8 211 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 FBXO22Q8NEZ5 403 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 C11orf24Q96F05 449 aaPredicted RBP22.64■■□□□ 1.21
TSKU-201ENST00000333090 PIP5K1AQ99755 562 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 C11orf16Q9NQ32 467 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 PCDH10Q9P2E7 1040 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 CLEC2DQ9UHP7 191 aa22.64■■□□□ 1.21
TSKU-201ENST00000333090 FAM227AF5H4B4 570 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 GFYI3L273 518 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 EIF3FO00303 357 aaPredicted RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 SCG5P05408 212 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 AP1S2P56377 157 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.63■■□□□ 1.21
TSKU-201ENST00000333090 ZNF385BQ569K4 471 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 KLHL17Q6TDP4 642 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 THOC6Q86W42 341 aaKnown RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 SLC34A3Q8N130 599 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 MAPKAP1Q9BPZ7 522 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 SLC35A5Q9BS91 424 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 C2orf49Q9BVC5 232 aaPredicted RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 THSD1Q9NS62 852 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 TMA7Q9Y2S6 64 aaKnown RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 PRAMEF33A0A0G2JMD5 474 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 H7C4K7 107 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 PRAMEF10O60809 474 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 ENTPD6O75354 484 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 TNFRSF21O75509 655 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 GASTP01350 101 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 HMGA1P17096 107 aaKnown RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 RORCP51449 518 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 RUNX1T1Q06455 604 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 PRR23CQ6ZRP0 262 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 C2orf15Q8WU43 125 aaKnown RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 TRMT61AQ96FX7 289 aaKnown RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 MAGEB10Q96LZ2 347 aaPredicted RBP22.63■■□□□ 1.21
TSKU-201ENST00000333090 BEX2Q9BXY8 128 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 CD84Q9UIB8 345 aa22.63■■□□□ 1.21
TSKU-201ENST00000333090 WWP2O00308 870 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 SOCS5O75159 536 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 FEN1P39748 380 aaKnown RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 CRISP1P54107 249 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 MXD1Q05195 221 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 PLD1Q13393 1074 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 TAF12Q16514 161 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 LRRC73Q5JTD7 316 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 FRMPD2BQ6IN97 320 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 TAGAPQ8N103 731 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 OR5AK3PQ8NH89 298 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 TMEM121BQ9BXQ6 578 aaPredicted RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 RANGRFQ9HD47 186 aaPredicted RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 FTSJ1Q9UET6 329 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 MAP4K5Q9Y4K4 846 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 ZAR1LA6NP61 321 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 CBLP22681 906 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 PSMA1P25786 263 aaKnown RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 SERPINA4P29622 427 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 OR1D2P34982 312 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 NLRP8Q86W28 1048 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 HJURPQ8NCD3 748 aaPredicted RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 GEMIN6Q8WXD5 167 aaKnown RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 FYTTD1Q96QD9 318 aaKnown RBP22.62■■□□□ 1.21
TSKU-201ENST00000333090 C19orf43Q9BQ61 176 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 SRRQ9GZT4 340 aa22.62■■□□□ 1.21
TSKU-201ENST00000333090 HMX3A6NHT5 357 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 MPZL2O60487 215 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 C6orf47O95873 294 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 GBAP04062 536 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 PRKCAP17252 672 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 XCR1P46094 333 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 SP140Q13342 867 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 LEXMQ3ZCV2 418 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 COQ8BQ96D53 544 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 TRIM39Q9HCM9 518 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 NUFIP1Q9UHK0 495 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms