RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CSTF2P33240 577 aaKnown RBP eCLIP12.51□□□□□ -0.41
VSTM4-202ENST00000332853 PPP2R2BQ00005 443 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 KIAA1614Q5VZ46 1190 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 OR56A1Q8NGH5 318 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 TSPEARQ8WU66 669 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 CAMK1GQ96NX5 476 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 TAS2R9Q9NYW1 312 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 PHF11Q9UIL8 331 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 STAT5AP42229 794 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 KCNAB2Q13303 367 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 VMACQ2NL98 169 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 AKAP14Q86UN6 197 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 DPH7Q9BTV6 452 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 GPR174Q9BXC1 333 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 A0A075B6Q4 140 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 PSMD9O00233 223 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 RASAL1O95294 804 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 ACADLP28330 430 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 SLC22A12Q96S37 553 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 SCAMP2O15127 329 aaKnown RBP12.51□□□□□ -0.41
VSTM4-202ENST00000332853 MAP2K4P45985 399 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 RPS3AP61247 264 aaKnown RBP12.51□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF554Q86TJ5 538 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 RNF175Q8N4F7 328 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 OR5AR1Q8NGP9 310 aa12.51□□□□□ -0.41
VSTM4-202ENST00000332853 C12orf43Q96C57 262 aaKnown RBP12.51□□□□□ -0.41
VSTM4-202ENST00000332853 STOX2Q9P2F5 926 aaPredicted RBP12.51□□□□□ -0.41
VSTM4-202ENST00000332853 HIDE1A8MVS5 230 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 GNSP15586 552 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 TNFRSF1BP20333 461 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 PHF19Q5T6S3 580 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF761Q86XN6 746 aaPredicted RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 ERI1Q8IV48 349 aaKnown RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 TTTY10Q9BZA0 68 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 PCDHB14Q9Y5E9 798 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 GPC6Q9Y625 555 aaPredicted RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 FAM240BA0A1B0GVZ2 78 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 ETFAP13804 333 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 GABRB3P28472 473 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SHMT2P34897 504 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 VBP1P61758 197 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CBX3Q13185 183 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 EXOC3L2Q2M3D2 409 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SPATS1Q496A3 300 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 DEFB134Q4QY38 66 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 VTCN1Q7Z7D3 282 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SLC12A9Q9BXP2 914 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 ITPAQ9BY32 194 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CPNE3O75131 537 aaKnown RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 LAMP1P11279 417 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SLC6A11P48066 632 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 KCTD11Q693B1 232 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 C7orf57Q8NEG2 295 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 FCGR1BQ92637 280 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 OR51I1Q9H343 314 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 GMEB2Q9UKD1 530 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 WASH3PC4AMC7 463 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 IST1P53990 364 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CLDN8P56748 225 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 GFOD2Q3B7J2 385 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SLC35F1Q5T1Q4 408 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 HTR3DQ70Z44 454 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CARM1Q86X55 608 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 RASGRP3Q8IV61 690 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 OR4N5Q8IXE1 308 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 MS4A12Q9NXJ0 267 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CA14Q9ULX7 337 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 MAFFQ9ULX9 164 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 ARHGEF33A8MVX0 844 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 HLA-FP30511 346 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 PGFP49763 221 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 SMSP52788 366 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 MYBPC3Q14896 1274 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 LMNTD1Q8N9Z9 388 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 OR8K5Q8NH50 307 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF483Q8TF39 744 aaPredicted RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CIDECQ96AQ7 238 aaPredicted RBP12.5□□□□□ -0.41
VSTM4-202ENST00000332853 PDCD10Q9BUL8 212 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 KCNK12Q9HB15 430 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 CCL26Q9Y258 94 aa12.5□□□□□ -0.41
VSTM4-202ENST00000332853 RPS6KA3P51812 740 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 DSC1Q08554 894 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF234Q14588 700 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 KRT77Q7Z794 578 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 WDR92Q96MX6 357 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms