RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 SVOPLQ8N434 492 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 PIK3C3Q8NEB9 887 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 RAD51AP1Q96B01 352 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 TAMM41Q96BW9 452 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 HHIPQ96QV1 700 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 C17orf62Q9BQA9 187 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 CXorf36Q9H7Y0 433 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 BRF2Q9HAW0 419 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 ZFR2Q9UPR6 939 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 TMEM229AB2RXF0 380 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 TPP2P29144 1249 aaPredicted RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 ASMTP46597 345 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 IDH2P48735 452 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 ARHGDIAP52565 204 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 PAGE2BQ5JRK9 111 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 KLHL17Q6TDP4 642 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 CBLL1Q75N03 491 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 TSEN54Q7Z6J9 526 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 B3GNT8Q7Z7M8 397 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 MEX3DQ86XN8 651 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 CCDC71Q8IV32 467 aaPredicted RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 ERI1Q8IV48 349 aaKnown RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 SHISA5Q8N114 240 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 CHCHD4Q8N4Q1 142 aa17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 VANGL1Q8TAA9 524 aaPredicted RBP17.37■□□□□ 0.37
LYSMD4-201ENST00000332728 SLC35G4P0C7Q5 338 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 PTNP21246 168 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 POU1F1P28069 291 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 MVDP53602 400 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 MAPK12P53778 367 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 RAD23AP54725 363 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 DLX2Q07687 328 aaPredicted RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TP53BP2Q13625 1128 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 SHQ1Q6PI26 577 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 EIF3MQ7L2H7 374 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 HIPK1Q86Z02 1210 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 FAM9CQ8IZT9 166 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 UTP15Q8TED0 518 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 GAB3Q8WWW8 586 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 FCRL1Q96LA6 429 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 INSM2Q96T92 566 aaPredicted RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 EFCAB11Q9BUY7 163 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3DA0A087WVF3 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3IA0A087WXS9 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3EA0A087X179 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3KA0A087X1G2 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3FA6NER0 549 aaPredicted RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3LB9A6J9 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 PRAMEF10O60809 474 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3HP0C7X1 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 SPTBP11277 2137 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 MVKQ03426 396 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 ZNF691Q5VV52 312 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3GQ6DHY5 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3CQ6IPX1 549 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 AHSA2Q719I0 299 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 PDZD3Q86UT5 571 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 TBC1D3Q8IZP1 549 aaPredicted RBP17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 C11orf65Q8NCR3 313 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 FEVQ99581 238 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 KLHL31Q9H511 634 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 WDR26Q9H7D7 661 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 FBXL12Q9NXK8 326 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 RPS6KA6Q9UK32 745 aa17.36■□□□□ 0.37
LYSMD4-201ENST00000332728 PSMD11O00231 422 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 RB1P06400 928 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 UBE3AQ05086 875 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 SPDYE7PQ495Y7 208 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 BORAQ6PGQ7 559 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 WDR53Q7Z5U6 358 aaPredicted RBP17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 SNX29P2Q8IUI4 249 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 ZNF540Q8NDQ6 660 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 OR5D16Q8NGK9 328 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 WFDC6Q9BQY6 131 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 ERAL1O75616 437 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 BCHEP06276 602 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 PSMB9P28065 219 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 MANFP55145 182 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 CLCA4Q14CN2 919 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 MLF2Q15773 248 aaPredicted RBP17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 RBM45Q8IUH3 476 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 SLC5A8Q8N695 610 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 NODALQ96S42 347 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 NIPSNAP1Q9BPW8 284 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 TM9SF3Q9HD45 589 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 ADPRHL2Q9NX46 363 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 LMCD1Q9NZU5 365 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 SNX5Q9Y5X3 404 aa17.35■□□□□ 0.37
LYSMD4-201ENST00000332728 PI15O43692 258 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 TMPRSS11DO60235 418 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 ABCB7O75027 752 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 C7P10643 843 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 AK4P27144 223 aaPredicted RBP17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 DNAJA1P31689 397 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 MLLT10P55197 1068 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 RPP38P78345 283 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 DUSP7Q16829 419 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 FAM129CQ86XR2 697 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 FLCNQ8NFG4 579 aa17.34■□□□□ 0.37
LYSMD4-201ENST00000332728 COQ8BQ96D53 544 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms