RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.06■□□□□ 0.327e-13■■■■□ 19.9
ACTB-201ENST00000331789 NAGSQ8N159 534 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 SYNPOQ8N3V7 929 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 PACRGLQ8N7B6 248 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 FAM47BQ8NA70 645 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 PATE1Q8WXA2 126 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 UCN3Q969E3 161 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 QRFPRQ96P65 431 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 TEFMQ96QE5 360 aaKnown RBP17.06■□□□□ 0.32
ACTB-201ENST00000331789 BDH2Q9BUT1 245 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 TRIM4Q9C037 500 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 OLAHQ9NV23 265 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 DGKBQ9Y6T7 804 aa17.06■□□□□ 0.32
ACTB-201ENST00000331789 PRUNE2Q8WUY3 3088 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 TOR1BO14657 336 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 CCNDBP1O95273 360 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 RASAL1O95294 804 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 CELA2BP08218 269 aaPredicted RBP17.05■□□□□ 0.32
ACTB-201ENST00000331789 DDCP20711 480 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 PPIBP23284 216 aaKnown RBP17.05■□□□□ 0.32
ACTB-201ENST00000331789 ALDH9A1P49189 494 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 HYAL2Q12891 473 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 ILF3Q12906 894 aaKnown RBP eCLIP17.05■□□□□ 0.32
ACTB-201ENST00000331789 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 LRRC23Q53EV4 343 aaPredicted RBP17.05■□□□□ 0.32
ACTB-201ENST00000331789 COX20Q5RI15 118 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 ERICH5Q6P6B1 374 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 ISLR2Q6UXK2 745 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 SFTPA2Q8IWL1 248 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 TTLQ8NG68 377 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 GPBAR1Q8TDU6 330 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 C17orf62Q9BQA9 187 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 SLC35A5Q9BS91 424 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 OSBPL11Q9BXB4 747 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 GMEB1Q9Y692 573 aa17.05■□□□□ 0.32
ACTB-201ENST00000331789 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 A6NHS1 94 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 C4orf51C9J302 202 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 SMNDC1O75940 238 aaKnown RBP eCLIP17.04■□□□□ 0.323e-14■■■■□ 20.3
ACTB-201ENST00000331789 THEGLP0DJG4 465 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ZNF23P17027 643 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 CHN2P52757 468 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 NHSL2Q5HYW2 709 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ZNF425Q6IV72 752 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 TMEM214Q6NUQ4 689 aaKnown RBP17.04■□□□□ 0.32
ACTB-201ENST00000331789 IYDQ6PHW0 289 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ANGPTL8Q6UXH0 198 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ZNF793Q6ZN11 406 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 DEFB119Q8N690 84 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 OR5AK3PQ8NH89 298 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 TMBIM1Q969X1 311 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 PYURFQ96I23 114 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 TMEM121BQ9BXQ6 578 aaPredicted RBP17.04■□□□□ 0.32
ACTB-201ENST00000331789 YY1AP1Q9H869 796 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 DDX31Q9H8H2 851 aaKnown RBP17.04■□□□□ 0.32
ACTB-201ENST00000331789 GPATCH2Q9NW75 528 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 C5AR2Q9P296 337 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ZNF639Q9UID6 485 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ADAM29Q9UKF5 820 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ACSL6Q9UKU0 697 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 SNX7Q9UNH6 387 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 CORO2BQ9UQ03 480 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 DMTF1Q9Y222 760 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 DPPA5A6NC42 116 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 PLOD2O00469 737 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 EI24O14681 340 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 DEAF1O75398 565 aaPredicted RBP17.04■□□□□ 0.32
ACTB-201ENST00000331789 PRSS23O95084 383 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ZNF682O95780 498 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 MVDP53602 400 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 FZD2Q14332 565 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 PLCL1Q15111 1095 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 LEXMQ3ZCV2 418 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 TRIM73Q86UV7 250 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 MFSD9Q8NBP5 474 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 MAL2Q969L2 176 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 ORAI3Q9BRQ5 295 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 FOXQ1Q9C009 403 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 TEX10Q9NXF1 929 aaPredicted RBP17.04■□□□□ 0.32
ACTB-201ENST00000331789 TAS2R9Q9NYW1 312 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 RAPGEFL1Q9UHV5 662 aa17.04■□□□□ 0.32
ACTB-201ENST00000331789 WBP11Q9Y2W2 641 aaKnown RBP17.04■□□□□ 0.32
ACTB-201ENST00000331789 A0A0A6YYD5 115 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 IGHV1OR15-9A0A0B4J2B8 117 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 SPTY2D1-AS1A0A0U1RR47 76 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 A0A1W2PPC4 97 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 CST1P01037 141 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 KDELR2P33947 212 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 AHRP35869 848 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 CRATP43155 626 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 SSR2P43308 183 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 PXNP49023 591 aaPredicted RBP17.03■□□□□ 0.32
ACTB-201ENST00000331789 GPR18Q14330 331 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 TMEM35AQ53FP2 167 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 TOR1AIP1Q5JTV8 583 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 Q7L0L9 218 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 PAQR7Q86WK9 346 aa17.03■□□□□ 0.32
ACTB-201ENST00000331789 CHERPQ8IWX8 916 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms