RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 AMER2Q8N7J2 671 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 DENND6BQ8NEG7 585 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 NFKBIDQ8NI38 313 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 MYLIPQ8WY64 445 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 SAMD11Q96NU1 681 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 COL21A1Q96P44 957 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 TCF25Q9BQ70 676 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 CCM2Q9BSQ5 444 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 SP140LQ9H930 580 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 SACM1LQ9NTJ5 587 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 TRANK1O15050 2925 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 CEP290O15078 2479 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 PRRC2BQ5JSZ5 2229 aaKnown RBP14.73□□□□□ -0.05
BRCC3-201ENST00000330045 PRAMEF25A6NGN4 478 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 LEFTY1O75610 366 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 GBAP04062 536 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 GABRB1P18505 474 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ELOAQ14241 798 aaKnown RBP14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF284Q2VY69 593 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 FBXO43Q4G163 708 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM240Q5SV17 173 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 REPS1Q96D71 796 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ABHD8Q96I13 439 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 RAD9AQ99638 391 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 HEPHQ9BQS7 1158 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF556Q9HAH1 456 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 THSD1Q9NS62 852 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 HCFC1R1Q9NWW0 138 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ANKMY1Q9P2S6 941 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 CCL26Q9Y258 94 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 A3GALT2U3KPV4 340 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 SAGE2PA6NJ88 616 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 CXCL14O95715 111 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 ADORA3P0DMS8 318 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 PDHA2P29803 388 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 SERPINB1P30740 379 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 GRK5P34947 590 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 HTRA4P83105 476 aaPredicted RBP14.72□□□□□ -0.05
BRCC3-201ENST00000330045 TEKQ02763 1124 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 FCHO2Q0JRZ9 810 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 CDC20Q12834 499 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 SLC13A2Q13183 592 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 E2F2Q14209 437 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF181Q2M3W8 571 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.72□□□□□ -0.05
BRCC3-201ENST00000330045 CPNE5Q9HCH3 593 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 C1GALT1Q9NS00 363 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 IMPAD1Q9NX62 359 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 LOC100506127A0A0U1RQW1 187 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 A8MVJ9 347 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 J3KTA2 159 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 DSCR3O14972 297 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 TLL1O43897 1013 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 PRLHRP49683 370 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 PNLIPRP1P54315 467 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 MC1RQ01726 317 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 ST3GAL4Q11206 333 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM115Q12893 351 aaPredicted RBP14.72□□□□□ -0.05
BRCC3-201ENST00000330045 CYP27C1Q4G0S4 372 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 ARSIQ5FYB1 569 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 PLPP4Q5VZY2 271 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 COMMD6Q7Z4G1 85 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 UBE2Q1Q7Z7E8 422 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 C7orf61Q8IZ16 206 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 OR9Q2Q8NGE9 314 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 GLYATL1Q969I3 302 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 CIDECQ96AQ7 238 aaPredicted RBP14.72□□□□□ -0.05
BRCC3-201ENST00000330045 KLHL25Q9H0H3 589 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 EHD1Q9H4M9 534 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM38AQ9H6F2 299 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 ACSL6Q9UKU0 697 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 DUSP12Q9UNI6 340 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 UGT2A1Q9Y4X1 527 aa14.72□□□□□ -0.05
BRCC3-201ENST00000330045 TBX1O43435 398 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 GPR37L1O60883 481 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 PTHP01270 115 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 FURINP09958 794 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 TIMP2P16035 220 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 PBLDP30039 288 aaPredicted RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 MAPK9P45984 424 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 EIF4HQ15056 248 aaKnown RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 ARMCX4Q5H9R4 360 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 TPRG1LQ5T0D9 272 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 C10orf62Q5T681 223 aaPredicted RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 TRIM40Q6P9F5 258 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM220Q6QAJ8 160 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CCDC80Q76M96 950 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 ARMCX6Q7L4S7 300 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 SYTL1Q8IYJ3 562 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 OXR1Q8N573 874 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 KBTBD8Q8NFY9 601 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF480Q8WV37 535 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 PPCDCQ96CD2 204 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CDADC1Q9BWV3 514 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 NXF2Q9GZY0 626 aaKnown RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 OR51E2Q9H255 320 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 NFKBIL1Q9UBC1 381 aaPredicted RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 MAP4K5Q9Y4K4 846 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 SAP18O00422 153 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms