RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CA13Q8N1Q1 262 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 TEX9Q8N6V9 391 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 GALNT11Q8NCW6 608 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 OR2L5Q8NG80 312 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 TSLPQ969D9 159 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 NPLQ9BXD5 320 aaPredicted RBP25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 PRM3Q9NNZ6 103 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 MAP10Q9P2G4 905 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 TNPO3Q9Y5L0 923 aaKnown RBP25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 CSAG2Q9Y5P2 127 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 TENM4Q6N022 2769 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 RBP1P09455 135 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 COL6A2P12110 1019 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 OR4D2P58180 307 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 TLR1Q15399 786 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 EXT1Q16394 746 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 PRR30Q53SZ7 412 aaPredicted RBP25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 LGSNQ5TDP6 509 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 MED27Q6P2C8 311 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 CUZD1Q86UP6 607 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 PLD6Q8N2A8 252 aaKnown RBP25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 CNDP1Q96KN2 507 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 PTCHD1Q96NR3 888 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 LPAR4Q99677 370 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 CPSF2Q9P2I0 782 aaKnown RBP25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 PCDHGA10Q9Y5H3 936 aa25.98■■□□□ 1.75
ATPAF1-201ENST00000329231 A0A0G2JN53 185 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 DYTNA2CJ06 578 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TRIM49D1C9J1S8 452 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 B3GALT2O43825 422 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TBX6O95947 436 aaPredicted RBP25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 SNRPAP09012 282 aaKnown RBP25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TNFRSF8P28908 595 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 PLA2G16P53816 162 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 ARG2P78540 354 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 PCBP2Q15366 365 aaKnown RBP eCLIP25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TSNAXIP1Q2TAA8 658 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TECRLQ5HYJ1 363 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 ADNP2Q6IQ32 1131 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 PAPD4Q6PIY7 484 aaKnown RBP25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TXLNGYQ9BZA5 131 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 TEKT2Q9UIF3 430 aa25.97■■□□□ 1.75
ATPAF1-201ENST00000329231 RIPK2O43353 540 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 SLU7O95391 586 aaKnown RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 SERPINB1P30740 379 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 ZNF169Q14929 603 aaPredicted RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 METTL2BQ6P1Q9 378 aaKnown RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 ABHD17CQ6PCB6 329 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 GSPT2Q8IYD1 628 aaKnown RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 LAS2Q8IYD9 372 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 CISD2Q8N5K1 135 aaKnown RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 SRFBP1Q8NEF9 429 aaKnown RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 ARMC2Q8NEN0 867 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 M1APQ8TC57 530 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 SNRNP40Q96DI7 357 aaKnown RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 QRFPRQ96P65 431 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 SERINC2Q96SA4 455 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 SLC29A3Q9BZD2 475 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 COPS7BQ9H9Q2 264 aaPredicted RBP25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 PRDM9Q9NQV7 894 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 ZNF358Q9NW07 568 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 TMCO1Q9UM00 188 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 MYO18BQ8IUG5 2567 aa25.96■■□□□ 1.75
ATPAF1-201ENST00000329231 FAM227AF5H4B4 570 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 PCNAP12004 261 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 PIK3CGP48736 1102 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 MTTPP55157 894 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 BTG2P78543 158 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 RUNX2Q13950 521 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 ABHD17BQ5VST6 288 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 B3GNTL1Q67FW5 361 aaPredicted RBP25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 GRHL2Q6ISB3 625 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 ADAMTS18Q8TE60 1221 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 ZNF473Q8WTR7 871 aaKnown RBP25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 SCYL1Q96KG9 808 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 F2RL3Q96RI0 385 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 ROGDIQ9GZN7 287 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 ANKZF1Q9H8Y5 726 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 ADGRE2Q9UHX3 823 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 CNTRLQ7Z7A1 2325 aa25.95■■□□□ 1.74
ATPAF1-201ENST00000329231 MYBL2P10244 700 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 TSFMP43897 325 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 RAB38P57729 211 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 LIPJQ5W064 366 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 OR7G3Q8NG95 312 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 HAS2Q92819 552 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 MTBPQ96DY7 904 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 KCNC2Q96PR1 638 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 MS4A8Q9BY19 250 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 ACTR8Q9H981 624 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 KCNK13Q9HB14 408 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 MMP25Q9NPA2 562 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 MMACHCQ9Y4U1 282 aa25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 COPG1Q9Y678 874 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-201ENST00000329231 UBR5O95071 2799 aaPredicted RBP25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 A8MUI8 341 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 UGDHO60701 494 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 MAOAP21397 527 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 GTF2H2Q13888 395 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms