RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 NPIPB8E9PQR5 432 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 RTCAO00442 366 aaKnown RBP13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 NPPBP16860 134 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 CTNNB1P35222 781 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 GGT2P36268 569 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 TGFBR2P37173 567 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 CRISP3P54108 245 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 ST3GAL4Q11206 333 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 ERAP2Q6P179 960 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 CACUL1Q86Y37 369 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 SLIRPQ9GZT3 109 aaKnown RBP13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 KLHL25Q9H0H3 589 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 OR51E2Q9H255 320 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 ZDHHC4Q9NPG8 344 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 CFAP20Q9Y6A4 193 aaKnown RBP13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 SCN8AQ9UQD0 1980 aa13.46□□□□□ -0.25
ATP2C1-201ENST00000328560 PRAMEF33A0A0G2JMD5 474 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 PIPSLA2A3N6 862 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 TMEM229AB2RXF0 380 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 QSOX1O00391 747 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 PRAMEF10O60809 474 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 C1orf105O95561 183 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 HSD3B1P14060 373 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 HSD3B2P26439 372 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 ACVR2AP27037 513 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 MED22Q15528 200 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 ZNF805Q5CZA5 627 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 PHF10Q8WUB8 498 aaKnown RBP13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 COQ8BQ96D53 544 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 C11orf24Q96F05 449 aaPredicted RBP13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 PITX2Q99697 317 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 C5AR2Q9P296 337 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 PRKAG2Q9UGJ0 569 aa13.46□□□□□ -0.26
ATP2C1-201ENST00000328560 A0A1W2PRB8 838 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 M0R082 166 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 RNASET2O00584 256 aaKnown RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 NPC1O15118 1278 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 TLL1O43897 1013 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 IL3P08700 152 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PRLHRP49683 370 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 TMED10P49755 219 aaKnown RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 RPS3AP61247 264 aaKnown RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 INAVAQ3KP66 663 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 TRIM40Q6P9F5 258 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PARS2Q7L3T8 475 aaKnown RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 GPR155Q7Z3F1 870 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 CADM3Q8N126 398 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 ZNF675Q8TD23 568 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 C16orf78Q8WTQ4 265 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 FAM129BQ96TA1 746 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 CHST8Q9H2A9 424 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PSORS1C1Q9UIG5 152 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PADI2Q9Y2J8 665 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PRAMEF25A6NGN4 478 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 HIDE1A8MVS5 230 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 LZTS3O60299 673 aaPredicted RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 DNTTP04053 509 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 GPR1P46091 355 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 RPS26P11Q5JNZ5 115 aaPredicted RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 REPS1Q96D71 796 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 VWCEQ96DN2 955 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 ASF1AQ9Y294 204 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 TRBC2A0A5B9 178 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 ANKDD1BA6NHY2 528 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 CLCA1A8K7I4 914 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 GADD45GO95257 159 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 TIMP1P01033 207 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PTHP01270 115 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 RHOP08100 348 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 C1GALT1C1LP0DN25 315 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 GTF2E2P29084 291 aaKnown RBP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 NFE2L1Q14494 772 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 ZNF404Q494X3 552 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 POC5Q8NA72 575 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 AQP11Q8NBQ7 271 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 Q96MT0 163 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
ATP2C1-201ENST00000328560 SERTM1A2A2V5 107 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 FGF19O95750 216 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 DLGAP3O95886 979 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 ANXA8P13928 327 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 PCSK2P16519 638 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 GRK5P34947 590 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 GRK3P35626 688 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 MVDP53602 400 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 MICAQ29983 383 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 MPEG1Q2M385 716 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 UTS2BQ765I0 119 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 CACTIN-AS1Q8N1I8 211 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 PSD4Q8NDX1 1056 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 VN1R2Q8NFZ6 395 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 OR52N2Q8NGI0 321 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 RHOXF1Q8NHV9 184 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms