RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RIMKLAQ8IXN7 391 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 KIAA2013Q8IYS2 634 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 BAHD1Q8TBE0 780 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 DNAJB14Q8TBM8 379 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 ZUFSPQ96AP4 578 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 TRAPPC9Q96Q05 1148 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 TACO1Q9BSH4 297 aaKnown RBP17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 NT5DC2Q9H857 520 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 NANOGQ9H9S0 305 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 SIRT5Q9NXA8 310 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 ATXN7L1Q9ULK2 861 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 PPT2Q9UMR5 302 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 MAPRE3Q9UPY8 281 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 MN1Q10571 1320 aaPredicted RBP17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 TLCD2A6NGC4 264 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 DNAJA2O60884 412 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CTSVO60911 334 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CBFA2T3O75081 653 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 TACR1P25103 407 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 PIK3CBP42338 1070 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 C21orf58P58505 322 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CYP4F2P78329 520 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CYP4F3Q08477 520 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 DPY19L1Q2PZI1 675 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 MSANTD1Q6ZTZ1 278 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 ASCL5Q7RTU5 278 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 TMPRSS9Q7Z410 1059 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 PLXDC1Q8IUK5 500 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 KRTCAP2Q8N6L1 136 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CHTF18Q8WVB6 975 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 GTF2H4Q92759 462 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 DUS3LQ96G46 650 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 TMEM74Q96NL1 305 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 FCRL4Q96PJ5 515 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 PITHD1Q9GZP4 211 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 LRRN3Q9H3W5 708 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 SYNDIG1Q9H7V2 258 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 C1GALT1Q9NS00 363 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 SLAMF8Q9P0V8 285 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 ANKMY1Q9P2S6 941 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 LRRC42Q9Y546 428 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 IGHV5-51A0A0C4DH38 117 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 C9P02748 559 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 GRK3P35626 688 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 PHEXP78562 749 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 RHDQ02161 417 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 WDR74Q6RFH5 385 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 SPATA24Q86W54 205 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 DHFR2Q86XF0 187 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 C19orf47Q8N9M1 422 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 OR8J3Q8NGG0 315 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CLHC1Q8NHS4 586 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 STARD8Q92502 1023 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 TSSK3Q96PN8 268 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CD180Q99467 661 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 CGREF1Q99674 301 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 RHBGQ9H310 441 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 DMRT3Q9NQL9 472 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 C6orf203Q9P0P8 240 aaPredicted RBP17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 ADGRE2Q9UHX3 823 aa17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 RIF1Q5UIP0 2472 aaKnown RBP17.88■□□□□ 0.45
EXOSC3-201ENST00000327304 STATHP02808 62 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 ACP1P24666 158 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 HNRNPFP52597 415 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 RPS13P62277 151 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 MRPS22P82650 360 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 SQSTM1Q13501 440 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 SNAP47Q5SQN1 464 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 STPG1Q5TH74 334 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 FBXO42Q6P3S6 717 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 GALNT18Q6P9A2 607 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 RNF111Q6ZNA4 994 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 PTRH1Q86Y79 214 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 NUDT8Q8WV74 236 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 RSRC1Q96IZ7 334 aaKnown RBP17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 OR52E6Q96RD3 313 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 SARGQ9BW04 601 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 TRIM15Q9C019 465 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 ALG2Q9H553 416 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 RMND5AQ9H871 391 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 PRM3Q9NNZ6 103 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 FAM60AQ9NP50 221 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 PILRAQ9UKJ1 303 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 MAN2B2Q9Y2E5 1009 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 PCDHGA4Q9Y5G9 962 aa17.87■□□□□ 0.45
EXOSC3-201ENST00000327304 TCRBV3S1A0A5B6 114 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 NVLO15381 856 aaKnown RBP17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 SH3BGRLO75368 114 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 ETHE1O95571 254 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 S100A3P33764 101 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 ASMTP46597 345 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 NHLH1Q02575 133 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 RABL3Q5HYI8 236 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 IRAK1BP1Q5VVH5 260 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 TMEM126BQ8IUX1 230 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 GOLM1Q8NBJ4 401 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 MFSD9Q8NBP5 474 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 LRGUKQ96M69 825 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 ACTR3BQ9P1U1 418 aa17.86■□□□□ 0.45
EXOSC3-201ENST00000327304 AP3M1Q9Y2T2 418 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms