RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	HTR1E	P28566	365 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	DNAJA1	P31689	397 aa	Known RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	GJA4	P35212	333 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	SIM1	P81133	766 aa	Predicted RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	TBC1D25	Q3MII6	688 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	CBARP	Q8N350	705 aa	Predicted RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	AQP11	Q8NBQ7	271 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	LRIG1	Q96JA1	1093 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	TEFM	Q96QE5	360 aa	Known RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	TRIB3	Q96RU7	358 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	POLM	Q9NP87	494 aa	Predicted RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	TAS2R9	Q9NYW1	312 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	TMEM181	Q9P2C4	612 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	PTBP2	Q9UKA9	531 aa	Known RBP	11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	SARDH	Q9UL12	918 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	HS3ST2	Q9Y278	367 aa		11.37	□□□□□ -0.59
DDR1-223	ENST00000324771	PRRT4	C9JH25	899 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	TFEC	O14948	347 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	BMP1	P13497	986 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	HOXC8	P31273	242 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	MPI	P34949	423 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	MAGEA12	P43365	314 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	RPS3A	P61247	264 aa	Known RBP	11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SP140	Q13342	867 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	ZSWIM9	Q86XI8	627 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SVOPL	Q8N434	492 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	HTRA1	Q92743	480 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SLC38A4	Q969I6	547 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SLC38A2	Q96QD8	506 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	LMAN2L	Q9H0V9	348 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	HMG20A	Q9NP66	347 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	CDC14A	Q9UNH5	594 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SMIM11A	P58511	58 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	GNA13	Q14344	377 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	IHH	Q14623	411 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	ADNP2	Q6IQ32	1131 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	NXPE4	Q6UWF7	544 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	CHMP1B	Q7LBR1	199 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	AMER2	Q8N7J2	671 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	GRHL3	Q8TE85	626 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	ARRDC3	Q96B67	414 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	CEP295NL	Q96MC4	621 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	PCBD2	Q9H0N5	130 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	RETREG1	Q9H6L5	497 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	HEBP1	Q9NRV9	189 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SDC3	O75056	442 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	MPC1L	P0DKB6	136 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	IL12A	P29459	219 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	SLAMF1	Q13291	335 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	EIF4H	Q15056	248 aa	Known RBP	11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	ASTL	Q6HA08	431 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	P2RY8	Q86VZ1	359 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	ADGRG5	Q8IZF4	528 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	NCSTN	Q92542	709 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	HDHD2	Q9H0R4	259 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	DNAJC27	Q9NZQ0	273 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	MRPS33	Q9Y291	106 aa	Known RBP	11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	PCDHB3	Q9Y5E6	796 aa		11.36	□□□□□ -0.59
DDR1-223	ENST00000324771	MYOF	Q9NZM1	2061 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771		A0A096LPI6	279 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	OR6C74	A6NCV1	312 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	RHPN2P1	A8MT19	583 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	B3GALT2	O43825	422 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	NR2F6	P10588	404 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	RPS3	P23396	243 aa	Known RBP eCLIP	11.35	□□□□□ -0.59	4e-7	■■■□□ 18.1
DDR1-223	ENST00000324771	ITGB8	P26012	769 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	PBX2	P40425	430 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	MAP2K4	P45985	399 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	CRISP3	P54108	245 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	SKP1	P63208	163 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	RNASE12	Q5GAN4	147 aa	Known RBP	11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	TMEM240	Q5SV17	173 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	KIAA1161	Q6NSJ0	714 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	USP53	Q70EK8	1073 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	DTD2	Q96FN9	168 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	IL20RA	Q9UHF4	553 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	PCDHB11	Q9Y5F2	797 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	CPED1	A4D0V7	1026 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	C7orf72	A4D263	438 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	CHURC1-FNTB	B4DL54	471 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771		H3BSH0	61 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	PRG2	P13727	222 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	HSD17B1	P14061	328 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	NTSR1	P30989	418 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	RPS21	P63220	83 aa	Known RBP	11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	AFMID	Q63HM1	303 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	FAM91A1	Q658Y4	838 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	ZNF554	Q86TJ5	538 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	FRMD1	Q8N878	549 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	C12orf43	Q96C57	262 aa	Known RBP	11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	FCRL4	Q96PJ5	515 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	CDH7	Q9ULB5	785 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	TAPBP	O15533	448 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	FRS3	O43559	492 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	AIRE	O43918	545 aa		11.35	□□□□□ -0.59
DDR1-223	ENST00000324771	MAOB	P27338	520 aa		11.35	□□□□□ -0.59

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